DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS5 and Rps2

DIOPT Version :9

Sequence 1:NP_001036652.1 Gene:mRpS5 / 3355089 FlyBaseID:FBgn0287187 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_032529.2 Gene:Rps2 / 16898 MGIID:105110 Length:293 Species:Mus musculus


Alignment Length:316 Identity:64/316 - (20%)
Similarity:108/316 - (34%) Gaps:72/316 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PGYIGLRNTSFFNKLPAEDIWRGVTAVSNAGKKRGRGKGSGKKVAKDLNKGQSIGFGKC-GRIWP 97
            ||..||.....|         ||.......|:.||||:|.|        :|:....||. .:.| 
Mouse    14 PGGPGLGGRGGF---------RGGFGSGLRGRGRGRGRGRG--------RGRGARGGKAEDKEW- 60

  Fly    98 GLNSPLIRGNELINQQKLNENLDRENGILKLRDSMGSFKLMKLNPIDRGWSGSKMPGRSIGPPDP 162
               .|:.:...|:...|:.              |:....|..|                     |
Mouse    61 ---IPVTKLGRLVKDMKIK--------------SLEEIYLFSL---------------------P 87

  Fly   163 VGDEEFVSFDTRV-LENKIVFIM----KGNMGRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALR 222
            :.:.|.:.|.... |:::::.||    :...|::.|:......|:.||..|.....:.||.||:|
Mouse    88 IKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIR 152

  Fly   223 KSKNRAGQKLINI-------SLCENRTIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVI 280
            .:...|...::.:       .:.:..|:........|...:.....|.|.|:|.....:.:..:.
Mouse   153 GAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMA 217

  Fly   281 GIKDLYAKIEGST-NIQNIAKAFFIGLMTQRSYQYIANETNSNIVQLQKTRNRFID 335
            ||.|.|....|.| .:.|.|||.|..:  .::|.|:..:.....|..:.....|.|
Mouse   218 GIDDCYTSARGCTATLGNFAKATFDAI--SKTYSYLTPDLWKETVFTKSPYQEFTD 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS5NP_001036652.1 Ribosomal_S5 171..235 CDD:278748 16/68 (24%)
rpsE_bact 178..323 CDD:130093 33/156 (21%)
Ribosomal_S5_C 251..318 CDD:281681 18/67 (27%)
Rps2NP_032529.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 16/57 (28%)
PTZ00070 54..273 CDD:240255 48/259 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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