DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap25 and snap23.2

DIOPT Version :9

Sequence 1:NP_001036641.1 Gene:Snap25 / 3355084 FlyBaseID:FBgn0011288 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001032194.2 Gene:snap23.2 / 641321 ZFINID:ZDB-GENE-051030-75 Length:200 Species:Danio rerio


Alignment Length:200 Identity:61/200 - (30%)
Similarity:102/200 - (51%) Gaps:17/200 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EELQINAQGVADESLESTRRMLALCEESKEAGIRTLVALDDQGEQLDRIEEGMDQINADMREAEK 83
            |::.|.|..|.:.|||||||:..:.||....|..|:..||:|||:|..::..:..||.|:::|:.
Zfish     4 EQITIKANHVTNASLESTRRIAQMTEECLNMGAETMTMLDEQGEKLHNVKRELGHINQDIKQAQA 68

  Fly    84 NLSGMEKCC--GIC--VLPCNKSQSFKEDDGTWKGNDDGKVVNNQPQRVMDDRNGMMAQA----- 139
            ||:.:....  ..|  :.|..:..:.|:..   |..:...|.:..|..|   :.|....|     
Zfish    69 NLNKLSSWTWKSFCSRLKPTKRESTSKQAS---KPKERQNVASCHPAAV---QKGQAVSAESTAP 127

  Fly   140 --GYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGESNEARIAV 202
              .||.|||||.||:|||:|:.::...|..:|:..|::.::|:.||:.|..|....:.....:|.
Zfish   128 SGPYITRITNDERENEMEDNLTKLGHCIKIIRDQTLEINNKLDEQNKTIQDIQNDVDQANDDVAT 192

  Fly   203 ANQRA 207
            ||::|
Zfish   193 ANKQA 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap25NP_001036641.1 SNARE_SNAP25N_23N 28..87 CDD:277242 24/58 (41%)
SNAP-25 98..149 CDD:279208 14/57 (25%)
SNARE_SNAP25C 151..209 CDD:277238 16/56 (29%)
snap23.2NP_001032194.2 SNARE 9..72 CDD:304603 25/62 (40%)
SNAP-25 82..138 CDD:279208 14/61 (23%)
SNARE_Qc 142..199 CDD:277194 15/55 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592303
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3065
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1197028at2759
OrthoFinder 1 1.000 - - FOG0000822
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.810

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