DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap25 and sec9

DIOPT Version :9

Sequence 1:NP_001036641.1 Gene:Snap25 / 3355084 FlyBaseID:FBgn0011288 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_596643.1 Gene:sec9 / 2540623 PomBaseID:SPBC26H8.02c Length:419 Species:Schizosaccharomyces pombe


Alignment Length:227 Identity:47/227 - (20%)
Similarity:99/227 - (43%) Gaps:35/227 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ELEELQINAQGVADESLESTRRMLALCEESKEAGIRTLVALDDQGEQLDRIEEGMD--QINADMR 79
            |:|.::...|.|..:||.|||..|.:...:::.|:.||..|.:|.|::...|:.:|  :|:|...
pombe   194 EVEAIKQKIQFVKQDSLSSTRNALLMAGNAEQMGLATLANLGEQTEKIATAEKELDISKIHAKRA 258

  Fly    80 EAE-KNLSGMEKCCGICVLP----------------CNKSQSFKEDD--------GTWKGNDDGK 119
            |.: :.|..:.:......:|                ..|..:.::|:        .:.|..|...
pombe   259 EEQARELKTLNRSMFAIHVPKPWGKAKRVAAEEARLAAKRDAERQDEMLNRQFAYRSQKRIDQAM 323

  Fly   120 VVNNQPQRVMDDRNG--MMAQAGYIGRITNDAREDEMEE----NMGQVNTMIGNLRNMALDMGSE 178
            ..|.:..:...|..|  ::.::.|  :...||.:|.||:    |:.|:..:...|:.:|...|.|
pombe   324 KDNMKSNKKKGDSKGVSILERSHY--QFEPDAEDDAMEKEIDGNLDQIGALATRLKGLAYATGQE 386

  Fly   179 LENQNRQIDRINRKGESNEARIAVANQRAHQL 210
            :::||.::..|:.|.:..:..:.:..:|...:
pombe   387 IDSQNARLGSIHDKSDRLDTDVYLNVERLRHI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap25NP_001036641.1 SNARE_SNAP25N_23N 28..87 CDD:277242 19/61 (31%)
SNAP-25 98..149 CDD:279208 9/76 (12%)
SNARE_SNAP25C 151..209 CDD:277238 14/61 (23%)
sec9NP_596643.1 SNARE_SEC9N 200..269 CDD:277239 20/68 (29%)
SNARE_SEC9C 359..417 CDD:277210 12/57 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3065
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2009
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000822
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.920

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