DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap25 and aex-4

DIOPT Version :10

Sequence 1:NP_001036641.1 Gene:Snap25 / 3355084 FlyBaseID:FBgn0011288 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_508641.2 Gene:aex-4 / 188509 WormBaseID:WBGene00006454 Length:234 Species:Caenorhabditis elegans


Alignment Length:220 Identity:58/220 - (26%)
Similarity:112/220 - (50%) Gaps:15/220 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 PSEEVAPQVPKTELEELQINAQGVADESLESTRRMLALCEESKEAGIRTLVALDDQGEQLDRIEE 69
            |:||...:..|.::.:|......:..:||:|:.:|:...::.....::|..||:||.||||:||.
 Worm    16 PTEETVQKRIKLKMVDLDAEIAKLNVQSLDSSIQMIRDIDQMNVDAVQTTAALEDQDEQLDKIEA 80

  Fly    70 GMDQINADMREAEKNLSGMEKCCGIC----VLPCNKSQSFKEDDGTWKGNDDGKVVNNQPQRVMD 130
            .:..:..|:.....|::.||..|| |    :|........|.:....|.....|:.:.:.:| .:
 Worm    81 NLSNVIDDLNVVSHNITAMEHYCG-CGFFRILRAPFKYFRKRERDIIKEEVLEKMTSPKLRR-KE 143

  Fly   131 DRNGMM---------AQAGYIGRITNDAREDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQI 186
            :.|.||         :...::.|:|.||.|||:|.|:.|::..:.:::|:|:||..:|:.|..::
 Worm   144 ESNMMMFTNSSKRRESTGDFMKRLTCDAIEDELERNLMQIDQGLESVKNLAVDMHVQLKLQEPKL 208

  Fly   187 DRINRKGESNEARIAVANQRAHQLL 211
            :||....|:|:..:...|.:..:||
 Worm   209 NRIEELTETNDFVVEGVNDKVKKLL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap25NP_001036641.1 SNARE_SNAP25N_23N 28..87 CDD:277242 17/58 (29%)
SNAP-25 98..150 CDD:459955 10/60 (17%)
SNARE_SNAP25C 151..209 CDD:277238 17/57 (30%)
aex-4NP_508641.2 PRK11281 14..>93 CDD:481316 21/76 (28%)
SNARE 173..231 CDD:473982 17/57 (30%)

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