DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG41099 and Ripk4

DIOPT Version :9

Sequence 1:NP_001015359.1 Gene:CG41099 / 3355072 FlyBaseID:FBgn0039955 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_001100573.1 Gene:Ripk4 / 304053 RGDID:1311691 Length:786 Species:Rattus norvegicus


Alignment Length:934 Identity:198/934 - (21%)
Similarity:320/934 - (34%) Gaps:330/934 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AAHRFGLPSLLGICERALVTSVGVRSCIRFYCVAEEVGASTLLEYCSSIISTHWDDLTTDDFQHM 210
            |..|:.|| :.|||:                   |.||  .::||..                  
  Rat    76 AKFRYILP-VYGICQ-------------------EPVG--LVMEYME------------------ 100

  Fly   211 SGPLLFEMLKTKTKHPLHAAVRLLREDVVSLCIQKYGNSLVNTFSENGILPLEMALSSKNAKIAK 275
            :|.|  |.|......|.....|::.|..|       |.:.::..|     |..:.|..|.|.|  
  Rat   101 TGSL--EKLLASEPLPWDLRFRIVHETAV-------GMNFLHCMS-----PPLLHLDLKPANI-- 149

  Fly   276 SLVD---------------NGMANINAVNMEG-FSLL----------KSAL--KNGDAFSANF-- 310
             |:|               |||::.:.::|:| |..:          ||.|  ...|.:|...  
  Rat   150 -LLDAHYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVI 213

  Fly   311 --LLDQNCLLDLPSKPSSD--TALHIICNYGPDNTPEIMEVVKK----------ILQR------Q 355
              :|.|       .||.||  ..|||:......:.||:..:.:.          ::||      |
  Rat   214 WGVLTQ-------KKPFSDEKNILHIMMKVVKGHRPELPPICRPRPRACASLIGLMQRCWHADPQ 271

  Fly   356 LNINIQNIKGETPLHIAIARRNVEMVKLLLKVPNID------------------INLRTYDEKCA 402
            :....|.|..||.   .:..:..|.||.|...|...                  .:...:|..|:
  Rat   272 VRPTFQEITSETE---DLCEKPDEEVKDLAHEPGEKSSPEPRSEARPESSRLKRASAPPFDNDCS 333

  Fly   403 LELSLSM----------GDHEFLIASILLSMGARTDRTNSKTGDSLLQVFALD---RHRGEKSAI 454
            |...||.          |..|      |....:.....:|.:|..|..|.::|   ..||..|..
  Rat   334 LSELLSQLDSGISQTLEGPEE------LSRSSSECKLPSSSSGKRLSGVSSVDSAFSSRGSLSLS 392

  Fly   455 F--LADFADLDHINFRGLTALHIAALNNMPNLVKKL---IVNGASSNL------KHIDCGLKSA- 507
            |  .|...||      |.|.:.          .|||   ||:|.::.|      :.:|..|.|: 
  Rat   393 FEREASTGDL------GPTDIQ----------KKKLVDAIVSGDTNKLMKILQPQDVDLVLDSSA 441

  Fly   508 --LHIAVEANAIDALEAFVELKNKSHDIDFNCQDINGDSPLSLCLSLKRTTLVPTLIRGGSDVNG 570
              ||:||||...:.:: ::.|.|.:.    |..:..|.:||.:.:..:...:|..|:...:.||.
  Rat   442 SLLHLAVEAGQEECVK-WLLLNNANP----NLTNKKGSTPLHMAVERRGRGIVELLLARKTSVNA 501

  Fly   571 KNKNNLSPLHQSIKNEDSDISLFLLEQGADITALTENLDSALDLSIKHDLSEVVDALCRRGIALS 635
            |:::..:.||.:.:|.|...:..|||:.|.:.                                .
  Rat   502 KDEDQWTALHFAAQNGDEASTRLLLEKNASVN--------------------------------E 534

  Fly   636 INKNGESPLWSALEKGYEDVAKILVRHGIDT-----DCWDEGPEGCRQTLLHRAIDENKESVAIF 695
            ::..|.:|:..|.:.|.|::.:.|:|.|:|.     |.|         ..||.|..:....:...
  Rat   535 VDFEGRTPMHVACQHGQENIVRTLLRRGVDVGLQGKDAW---------LPLHYAAWQGHLPIVKL 590

  Fly   696 LIQSQCDLDSSRQPGPNGEGGDEAQDKASPLHLCCHWGQTKVLQTLIDHGANVNLIDAESKSPLH 760
            |         ::|||.:...  :..|..:||||....|..:|.:.|||..:::|:...::::|||
  Rat   591 L---------AKQPGVSVNA--QTLDGRTPLHLAAQRGHYRVARILIDLSSDINICSLQAQTPLH 644

  Fly   761 VAIESQYDEIISILLCHPDIDLKLRDKSGNTPFATALDFRNHNAAQRILDRFPTAAEQMDIRGRN 825
            ||.|:                                   .|.:..|:|.......|.:...|..
  Rat   645 VAAET-----------------------------------GHTSTARLLLHRGAGKEALTSEGYT 674

  Fly   826 FLHLAILKDDLESVLFLLAIQVDVNSRVHDANQSSPLHLAAASQNEMITRNLILAGARMNERDAV 890
            .||||.....|.:|..|:..:.||.:|       .||:..|                        
  Rat   675 ALHLAARNGHLATVKLLIEEKADVLAR-------GPLNQTA------------------------ 708

  Fly   891 QKLPLHIAIERGNLPAVSALIQNNAD-YDATDADGNNALHIAVRCAQFFIVRELLTE-SRVNAEA 953
                ||:|..||:...|..|:  :|| .|.:|..|.:|||:|.:......|..||.. :.:|.::
  Rat   709 ----LHLAAARGHSEVVEELV--SADLIDLSDEQGLSALHLAAQGRHSQTVEILLKHGAHINLQS 767

  Fly   954 TNLKGRNPLHELCRVVEDSTAGLI 977
            ...:|.          :.|||.|:
  Rat   768 LKFQGG----------QSSTATLL 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41099NP_001015359.1 BTB 67..164 CDD:279045 7/17 (41%)
BTB 75..166 CDD:197585 7/19 (37%)
ANK 252..385 CDD:238125 40/182 (22%)
ANK repeat 291..322 CDD:293786 9/47 (19%)
ANK repeat 325..362 CDD:293786 10/54 (19%)
Ank_2 330..431 CDD:289560 25/144 (17%)
ANK 463..595 CDD:238125 33/143 (23%)
ANK repeat 468..501 CDD:293786 9/41 (22%)
Ank_2 473..572 CDD:289560 26/110 (24%)
ANK repeat 503..539 CDD:293786 11/38 (29%)
ANK 536..660 CDD:238125 22/123 (18%)
ANK repeat 541..572 CDD:293786 7/30 (23%)
ANK repeat 574..637 CDD:293786 8/62 (13%)
Ank_2 579..670 CDD:289560 18/95 (19%)
ANK repeat 639..670 CDD:293786 10/35 (29%)
Ank_2 644..752 CDD:289560 27/112 (24%)
ANK repeat 672..721 CDD:293786 7/48 (15%)
ANK 721..843 CDD:238125 28/121 (23%)
ANK repeat 723..752 CDD:293786 10/28 (36%)
ANKYR 752..977 CDD:223738 48/226 (21%)
ANK repeat 754..786 CDD:293786 6/31 (19%)
ANK 820..944 CDD:238125 31/124 (25%)
ANK repeat 822..855 CDD:293786 11/32 (34%)
ANK repeat 857..888 CDD:293786 3/30 (10%)
ANK 885..1017 CDD:238125 25/95 (26%)
ANK repeat 890..921 CDD:293786 10/31 (32%)
ANK repeat 923..955 CDD:293786 9/32 (28%)
ANK repeat 996..1021 CDD:293786
FYVE_ANFY1 1054..1116 CDD:277267
Ripk4NP_001100573.1 STKc_RIP4_like 25..290 CDD:270927 58/280 (21%)
TyrKc 26..279 CDD:197581 55/266 (21%)
ANK repeat 442..470 CDD:293786 9/32 (28%)
Ank_2 444..536 CDD:289560 25/128 (20%)
ANK 471..591 CDD:238125 30/160 (19%)
ANK repeat 473..503 CDD:293786 7/29 (24%)
ANK repeat 505..536 CDD:293786 8/62 (13%)
ANK repeat 538..569 CDD:293786 9/30 (30%)
Ank_2 544..634 CDD:289560 26/109 (24%)
ANK repeat 571..602 CDD:293786 9/50 (18%)
ANK 600..725 CDD:238125 41/196 (21%)
ANK repeat 605..636 CDD:293786 11/30 (37%)
Ank_2 610..701 CDD:289560 29/125 (23%)
ANK repeat 638..669 CDD:293786 10/65 (15%)
ANK repeat 671..701 CDD:293786 10/29 (34%)
Ank_2 676..766 CDD:289560 33/126 (26%)
ANK 731..>766 CDD:238125 11/34 (32%)
ANK repeat 736..766 CDD:293786 9/29 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0192
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.