DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG41099 and Pbk

DIOPT Version :9

Sequence 1:NP_001015359.1 Gene:CG41099 / 3355072 FlyBaseID:FBgn0039955 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_001073406.1 Gene:Pbk / 290326 RGDID:1309565 Length:337 Species:Rattus norvegicus


Alignment Length:260 Identity:54/260 - (20%)
Similarity:81/260 - (31%) Gaps:103/260 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 LKNKSHDIDFNCQDINGDSPLSLCLSLKRTTLVPTLIRGGSD-----VNGKNKNNLSP------- 578
            |||.:|......:.....|..||||:::         .||..     :..:||::.||       
  Rat    89 LKNLNHPNIVGYRAFTEASDGSLCLAME---------YGGEKSLNDLIEERNKDSGSPFPAAVIL 144

  Fly   579 ------------LHQSIKNEDSDISLFLLEQGADITALTENLDSALDLSIKHDLSEVVDALCRRG 631
                        |||..|....||                   .:.::.||.|...:  .:|..|
  Rat   145 RVALHMARGLKYLHQEKKLLHGDI-------------------KSSNVVIKGDFETI--KICDVG 188

  Fly   632 IALSINKN-----------GESPLWSALEKGYEDVAKILVRHGIDTD----------CWDEGPEG 675
            ::|.:::|           |..| |...|        .|..:||.||          .|:     
  Rat   189 VSLPLDENMTVTDPEACYIGTEP-WKPKE--------ALEENGIITDKADMFAFGLTLWE----- 239

  Fly   676 CRQTLLHRAI---DENKESVAIFLIQSQCDLDS-------SRQPGPNGEGGDEAQDKASPLHLCC 730
             ..||....|   |::.:..|.|   .:.|.|.       ..:|..|.|..||:..|...|...|
  Rat   240 -MMTLCIPHINLPDDDDDEDATF---DESDFDDEAYYAALGTRPSINMEELDESYQKVIELFCVC 300

  Fly   731  730
              Rat   301  300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41099NP_001015359.1 BTB 67..164 CDD:279045
BTB 75..166 CDD:197585
ANK 252..385 CDD:238125
ANK repeat 291..322 CDD:293786
ANK repeat 325..362 CDD:293786
Ank_2 330..431 CDD:289560
ANK 463..595 CDD:238125 21/92 (23%)
ANK repeat 468..501 CDD:293786
Ank_2 473..572 CDD:289560 11/50 (22%)
ANK repeat 503..539 CDD:293786 4/12 (33%)
ANK 536..660 CDD:238125 28/158 (18%)
ANK repeat 541..572 CDD:293786 7/35 (20%)
ANK repeat 574..637 CDD:293786 14/81 (17%)
Ank_2 579..670 CDD:289560 22/111 (20%)
ANK repeat 639..670 CDD:293786 10/51 (20%)
Ank_2 644..752 CDD:289560 24/107 (22%)
ANK repeat 672..721 CDD:293786 13/58 (22%)
ANK 721..843 CDD:238125 3/10 (30%)
ANK repeat 723..752 CDD:293786 2/8 (25%)
ANKYR 752..977 CDD:223738
ANK repeat 754..786 CDD:293786
ANK 820..944 CDD:238125
ANK repeat 822..855 CDD:293786
ANK repeat 857..888 CDD:293786
ANK 885..1017 CDD:238125
ANK repeat 890..921 CDD:293786
ANK repeat 923..955 CDD:293786
ANK repeat 996..1021 CDD:293786
FYVE_ANFY1 1054..1116 CDD:277267
PbkNP_001073406.1 PKc_TOPK 32..319 CDD:270903 54/260 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0192
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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