DRSC/TRiP Functional Genomics Resources

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Protein Alignment Haspin and C55C3.8

DIOPT Version :9

Sequence 1:NP_001015349.2 Gene:Haspin / 3355064 FlyBaseID:FBgn0046706 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_001033406.2 Gene:C55C3.8 / 3896784 WormBaseID:WBGene00044501 Length:305 Species:Caenorhabditis elegans


Alignment Length:298 Identity:54/298 - (18%)
Similarity:96/298 - (32%) Gaps:98/298 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 PGKWRKSLNNFIRSKITETNFTKKVERRSSICQDRKSLVLKGEH----KFENKYEEDVLKYCHQC 234
            |..|||:|...::                        ::..||.    .||.||::.        
 Worm    28 PQTWRKNLTGSVK------------------------MLGGGEGCDTVVFEVKYKDQ-------- 60

  Fly   235 TPLPFNTAYEQHKLLNTKKIGEGAYGEVFRCSRNQEVLKDHISDIVLKIIPLEGSTVINGEKQKT 299
                 |.|.:..| :|.......|..|:..|.:..|:.|.||                       
 Worm    61 -----NRAVKLLK-INNDDDARSAANELLVCKKVSELKKAHI----------------------- 96

  Fly   300 FSQILPEIIITKKMCSLRTSKTNSTNGFVSIQKVSLVKGRYPPHFIKLWEKYDNEKGSENDHPEL 364
            |..:|...:.......|:         |....::||              :||....|...:   
 Worm    97 FLSVLDSFLANANQLPLQ---------FRPALRLSL--------------EYDESIESVGPY--- 135

  Fly   365 FGDNQLFAVLELKFAGSDMANFKFLNSEQSYYALQQIILALAVGEEEYQFEHRDLHLGNILIEYT 429
                  |.::.::..|...:.||:....|....:.|:|..|.:.|.....||.|:...|||:...
 Worm   136 ------FLIIIMELGGPSTSQFKYATPMQRVSVVGQLIAGLMIAERSLDLEHNDIKSLNILLRVV 194

  Fly   430 NKKH-IVCTFKSSNLTLLSKGVNVTIIDYTLSRVTIND 466
            |:.: ::.|...::.|.....:.|.::|:..||:..:|
 Worm   195 NRSNKLIFTINGNDYTFKDHEIRVQLVDFGKSRINQSD 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspinNP_001015349.2 PKc_like 252..>426 CDD:304357 30/173 (17%)
DUF3635 479..>545 CDD:289128
C55C3.8NP_001033406.2 PKc_like 45..>235 CDD:389743 49/257 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24419
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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