DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Haspin and C50H2.7

DIOPT Version :9

Sequence 1:NP_001015349.2 Gene:Haspin / 3355064 FlyBaseID:FBgn0046706 Length:566 Species:Drosophila melanogaster
Sequence 2:NP_505555.2 Gene:C50H2.7 / 183691 WormBaseID:WBGene00008243 Length:181 Species:Caenorhabditis elegans


Alignment Length:114 Identity:39/114 - (34%)
Similarity:57/114 - (50%) Gaps:9/114 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 VLELKFAGSDMANFKFLNSEQSYYALQQIILALAVGEEEYQFEHRDLHLGNILIEYTNKKHIVCT 437
            :|..|..|..::..|.|:..|....|.||:|:|.:|:.|.||.|.||:.||:||..|.||.|...
 Worm    35 ILITKDGGMPISKIKPLSDSQVLSVLSQILLSLYIGKRELQFSHNDLNPGNLLISETKKKSISYK 99

  Fly   438 FKSSNLTLLSKGVNVTIIDYTLSRVTIN-------DCCYFNDLSRDEEL 479
            ....::.:.|.|..:|:||  |.:.|.:       ||...|...||:.|
 Worm   100 KDGKSIKIKSHGRFLTLID--LQKSTFDEKEDKGLDCWKLNSRVRDQFL 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HaspinNP_001015349.2 PKc_like 252..>426 CDD:304357 20/52 (38%)
DUF3635 479..>545 CDD:289128 1/1 (100%)
C50H2.7NP_505555.2 PKc_like <3..>98 CDD:304357 26/62 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5072
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6322
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

Return to query results.
Submit another query.