Protein Alignment eIF4B and RBP47A

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_001321909.1
• Gene: RBP47A / 841384
• AraportID: AT1G49600
• Length: 450
• Species: Arabidopsis thaliana
• Alignment Length: 278
• Identity: 59/278 - (21%)
• Similarity: 98/278 - (35%)
• Gaps: 85/278 - (30%)

  Fly    31 TTQVS--KKIRNLDGDDSDDGSGTLPLVYQLPTAPRANRIFDDNSIPH-KAPF------------ 80
            |.:||  |.|||.....| :|.|.:..:.: ..|..|.:.|...::|: :.||
plant   142 TNEVSSVKVIRNKQTCQS-EGYGFVEFLSR-SAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEK 204

  Fly    81 ---------IAYINNLPFDANEDDLYEFFEGINLISLRLPRE-------DGENGRSRGFGYVELE 129
                     ..::.:|..|.::..|.|.|.|      |.|..       |...|||:|:|:|...
plant   205 RASENGPDLSIFVGDLAPDVSDAVLLETFAG------RYPSVKGAKVVIDSNTGRSKGYGFVRFG 263

  Fly   130 NREDLIHVLS-LPDPSIKGRRIRIELSNEN-----DQQSRQKSNRRFDGFGNNGDNRDSGNWRRD 188
            :..:....:: :.......|::|:.::...     .||:..::.....|.|.||...|.
plant   264 DENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDG------ 322

  Fly   189 SQNNGSNF--GYSSNFERSFNRERKSLPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYR 251
            ..||.:.|  |..::.            ..:|:..|.|          |..      |.||.|..
plant   323 ESNNSTIFVGGLDADV------------TEEDLMQPFS----------DFG------EVVSVKIP 359

  Fly   252 EGR----VKIADRYSREE 265
            .|:    |:.|:|.|.||
plant   360 VGKGCGFVQFANRQSAEE 377

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	19/114 (17%)
RBP47A	NP_001321909.1	RRM1_SECp43_like	120..200	CDD:409780	16/59 (27%)
		RRM2_SECp43_like	212..291	CDD:409781	17/84 (20%)
		RRM_SF	326..397	CDD:473069	18/80 (23%)