Protein Alignment eIF4B and U1-70K

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_190636.1
• Gene: U1-70K / 824230
• AraportID: AT3G50670
• Length: 427
• Species: Arabidopsis thaliana
• Alignment Length: 445
• Identity: 79/445 - (17%)
• Similarity: 148/445 - (33%)
• Gaps: 162/445 - (36%)

  Fly    30 GTTQVSKKIRNLDGDDSDDGSGTLPLVYQLPTAPRANRIFDDNSIPHKAPFIAYINNLPFDANED 94
            |..:.::.::..|.::..:.:|.                      |:|..|::.:|   ::::|.
plant   113 GVEKAAEDLKKYDPNNDPNATGD----------------------PYKTLFVSRLN---YESSES 152

  Fly    95 DLYEFFEG------INLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLPD-PSIKGRRIRI 152
            .:...||.      ::|::      |....:.:|:.::|..:..|:.......| ..|.|||:.:
plant   153 KIKREFESYGPIKRVHLVT------DQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLV 211

  Fly   153 ELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSSNFERSFNRERKSLPDRD 217
            ::..                      .|...|||......|.........|.....::.
plant   212 DVER----------------------GRTVPNWRPRRLGGGLGTSRVGGGEEIVGEQQP------ 248

  Fly   218 DVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYREGRVKIADRYSREETSKVEEERPKLNLKPRT 282
                  ..|||   ||.:.|..|.|.|:..||.:|          ||.:.::..|:|:...:.|.
plant   249 ------QGRTS---QSEEPSRPREEREKSREKGKE----------RERSRELSHEQPRERSRDRP 294

  Fly   283 LPLPDVKTIEFEKCDVDEFNLDK-QGGTSSLNVFGSAKPVDTAARELEIEQRLALARKQDKGRRE 346
            ..              |:.:.|: |||                 |:.:.:.|....|.:|:|.|
plant   295 RE--------------DKHHRDRDQGG-----------------RDRDRDSRRDRDRTRDRGDR- 327

  Fly   347 QGLNEKLAELQVDKNDNESLSATVSWRTNQDYKESDKINKCPGEKQRDEEIHRLNHARGQFNR-- 409
                        |:.|.:....    ||::|: :.|:..|    |:||.|.....|..|..:|
plant   328 ------------DRRDRDRGRD----RTSRDH-DRDRSRK----KERDYEGGEYEHEGGGRSRER 371

  Fly   410 -------PELLR-----EKPNANGESKR-------DCRNDRSV--SKKTSQNDLV 443
                   ||..|     ::.:.:..|.|       |.|.:|..  ||::...:.|
plant   372 DAEYRGEPEETRGYYEDDQGDTDRYSHRYDKMEEDDFRYEREYKRSKRSESREYV 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	15/87 (17%)
U1-70K	NP_190636.1	U1snRNP70_N	40..129	CDD:432406	2/15 (13%)
		RRM_snRNP70	137..227	CDD:409682	20/120 (17%)
		PRK12678	245..>395	CDD:237171	45/227 (20%)