Protein Alignment eIF4B and AT3G06970

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_187353.2
• Gene: AT3G06970 / 819882
• AraportID: AT3G06970
• Length: 317
• Species: Arabidopsis thaliana
• Alignment Length: 306
• Identity: 60/306 - (19%)
• Similarity: 111/306 - (36%)
• Gaps: 77/306 - (25%)

  Fly    83 YINNLPFDANEDDLYEFFE------GINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLP 141
            ::.||.:....|||..:||      ..|::|...|      |||:|:|::...:....:..|...
plant    15 FVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYP------GRSKGYGFITFRDYVSTVRALQNS 73

  Fly   142 DPSIKGRRIRIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGS------------ 194
            .|.|.||.....|::...:|:....|.                       |||
plant    74 KPIIDGRTTNCNLASAGAKQNMNHPNL-----------------------NGSFNYVIPPHQYQQ 115

  Fly   195 -------------------NFGYSSNFERSFNRERKSLPDRDDVNTPGSW-RTSARPQSIDTSP- 238
                               .:.|..|....:....:.:.:|.|..|..:| :|:.||..|.|.|
plant   116 APQHVIPYCPPHTWNHVWGQYIYMYNNNPCYYYPTQMIHNRSDFMTHLAWHQTNRRPVIISTPPR 180

  Fly   239 TRREVEQVSEKYREGRVKIADRYSREETSK----VEEERPKLNLKPRTLPLP-DVK---TIEFEK 295
            :..:.|.:||..:|....:|...:.|..:|    |::::.| |:|.:.:... |:|   ..:.||
plant   181 SSVQTESISETDQELIADVAHHDNEEAVTKSDSDVDQQKAK-NVKGKNIGQDGDIKQDARDQEEK 244

  Fly   296 CDVDEFNLDKQGGTSSLNVFGSAKPVDTAARELEIEQRLALARKQD 341
            .:..|.::.:........:.|..|.|:....::..||:....:.:|
plant   245 INDQEDSIKQDVDEEQNKISGIEKVVENQEVKIMCEQKHGTKQDED 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	21/81 (26%)
AT3G06970	NP_187353.2	PABP-1234	<3..182	CDD:130689	38/195 (19%)
		RRM_SF	12..87	CDD:473069	20/77 (26%)