Protein Alignment eIF4B and Trnau1ap

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_082201.2
• Gene: Trnau1ap / 71787
• MGIID: 1919037
• Length: 287
• Species: Mus musculus
• Alignment Length: 289
• Identity: 64/289 - (22%)
• Similarity: 103/289 - (35%)
• Gaps: 96/289 - (33%)

  Fly    19 QSFLCNSDAPVGTTQVSKK-IRN-LDGDDSDDGSGTLPLVY------QLPTAPRANRIFDDNSIP 75
            ::|:..:.|.:|.|.:|.| ||| |.|         :|..|      .|.||.:.....:...:|
Mouse    16 ENFISRAFATMGETVMSVKIIRNRLTG---------IPAGYCFVEFADLATAEKCLHKINGKPLP 71

  Fly    76 HKAP--------------------FIAYINNLPFDANEDDLYEFFEGINLISLRLPREDG----- 115
            ...|                    :..::.:|..|.::..|||||..:      .|...|
Mouse    72 GATPAKRFKLNYATYGKQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKV------YPSCRGGKVVL 130

  Fly   116 -ENGRSRGFGYV----ELENREDLIHV------------LSLPDPSIKGRRIR-IELSNENDQQS 162
             ..|.|:|:|:|    |||.:..|...            ||:..|  |..|:: :|.|    |..
Mouse   131 DPTGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRLSVAIP--KASRVKPVEYS----QMY 189

  Fly   163 RQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGS------NFGYSSNFERSFNRERKSLPDRDDVNT 221
            ....|:.:..:.|.     ...|..| ||.||      .:||:.:..:::    :.:.| |.:..
Mouse   190 SYSYNQYYQQYQNY-----YAQWGYD-QNTGSYSYSYPQYGYTQSTMQTY----EEVGD-DALED 243

  Fly   222 PGSWRTSARPQSIDTSPTRREVEQVSEKY 250
            |.       ||...|...:..:||..|.|
Mouse   244 PA-------PQLDVTEANKEFMEQSEELY 265

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	26/123 (21%)
Trnau1ap	NP_082201.2	RRM1_SECp43	4..87	CDD:410022	18/79 (23%)
		RRM2_SECp43	95..176	CDD:410024	21/88 (24%)
		Trnau1ap	<206..284	CDD:465438	18/73 (25%)