DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and TRA2B

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_004584.1 Gene:TRA2B / 6434 HGNCID:10781 Length:288 Species:Homo sapiens


Alignment Length:166 Identity:44/166 - (26%)
Similarity:70/166 - (42%) Gaps:27/166 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 EDDLYEFFEGINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLPD-PSIKGRRIRIELSN 156
            |.||.|.|.....|:......|.::.|||||.:|..||.:|........: ..:.|||||::.| 
Human   131 ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS- 194

  Fly   157 ENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSSN--FERSFNRER------KSL 213
             ..::....:...:.|....|.:|     |||..:.|.:.||...  :.||:....      ::.
Human   195 -ITKRPHTPTPGIYMGRPTYGSSR-----RRDYYDRGYDRGYDDRDYYSRSYRGGGGGGGGWRAA 253

  Fly   214 PDRDDV---NTP------GSWRTSARPQSIDTSPTR 240
            .|||.:   .:|      |.:|:.:|.:|.  ||.|
Human   254 QDRDQIYRRRSPSPYYSRGGYRSRSRSRSY--SPRR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 22/66 (33%)
TRA2BNP_004584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114
RRM_TRA2 117..196 CDD:409798 22/66 (33%)
Linker 193..230 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288 11/48 (23%)
Blue background indicates that the domain is not in the aligned region.

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