Protein Alignment eIF4B and rbm39b

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_001014392.1
• Gene: rbm39b / 541556
• ZFINID: ZDB-GENE-050327-97
• Length: 539
• Species: Danio rerio
• Alignment Length: 373
• Identity: 71/373 - (19%)
• Similarity: 125/373 - (33%)
• Gaps: 114/373 - (30%)

  Fly     6 KKGKKNKGTVISLQSFLCNSDAPVGTTQVSKKIRNLDGDDSDDGSGTLPLVYQLPTAPRANRIFD 70
            :..:::||  |:...|:.::..|:......:::..            :|::.|...|.: ||...
Zfish   202 RNSRRSKG--IAYVEFVDSTSVPLAIGLTGQRVLG------------VPIIVQASQAEK-NRAAA 251

  Fly    71 DNSIPHK---APFIAYINNLPFDANEDDLYEFF------EGINLISLRLPREDGENGRSRGFGYV 126
            ..|:..:   .|...|:.:|.|:..||.|...|      |||.|:.      |.|.|||:|:|::
Zfish   252 MASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMM------DSETGRSKGYGFI 310

  Fly   127 ELENREDLIHVLSLPDPSIKGRRIRIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQN 191
            ...                             |.:..:|:..:.:||...|.....|:..
Zfish   311 SFA-----------------------------DAECAKKALEQLNGFELAGRPMKVGHVT----- 341

  Fly   192 NGSNFGYSSNFERSFNRERKSLPDRDDVNTPGSWRTSARPQSIDTSPTRREVEQVSEKYREG--- 253
                       |||......|..|.|::...|          ||...|.|  .|:..:..||
Zfish   342 -----------ERSDASSASSFLDNDELERTG----------IDLGTTGR--LQLMARLAEGTGL 383

  Fly   254 RVKIADRYSREETSKVE-EERPKLNLKPRTLPLPDVKTIEFEKCDVDEFNLDKQG-GTSSLNVFG 316
            ::..|.:.:.:.:..|. ...|..:..|..:|.|.:.         ...||..|. .|..|.:..
Zfish   384 QIPAAAKQALQMSGSVSFGNMPNASATPPLIPNPGMN---------QAMNLPTQPLATHCLQLSN 439

  Fly   317 SAKPVDTAARELEIEQRLALARKQD---KGRREQGLNEKLAELQVDKN 361
            ...|      ::|.|....:..:.|   :.|:..|    :..:.||||
Zfish   440 MFNP------QMENEPGWDIEIRDDVIEECRKHGG----VIHIYVDKN 477

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	19/86 (22%)
rbm39b	NP_001014392.1	SF-CC1	76..526	CDD:273721	71/373 (19%)