Protein Alignment eIF4B and Rbp4

DIOPT Version :10

• Sequence 1: NP_001015319.1
• Gene: eIF4B / 3355041
• FlyBaseID: FBgn0020660
• Length: 459
• Species: Drosophila melanogaster
• Sequence 2: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 277
• Identity: 53/277 - (19%)
• Similarity: 87/277 - (31%)
• Gaps: 89/277 - (32%)

  Fly    92 NEDDLYEFFEGINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSLPDPS-----IKGRRIR 151
            :|:.:.|:|.....::......|.|.||.|.||::|            ..|||     :..|:..
  Fly   148 DENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLE------------FVDPSSAEKALAPRKHW 200

  Fly   152 IELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSSNFERSFNRERKSLPDR 216
            |..:....::|.||::|||                        .|...|:....:...:.:..|.
  Fly   201 ILQTLVEVKRSTQKADRRF------------------------RFPIFSSVRAGYIPPQPATADS 241

  Fly   217 DDVNTP-----------------GSWRTSARPQSIDTSPTRREV-----EQVSEKYREG------ 253
            .:.|.|                 ..|.....|.:...:|.:...     :|::|....|
  Fly   242 YNYNNPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMW 306

  Fly   254 ----RVKIADRYSREE--TSKVEEERPKLNLKPRTLPLPDVKTIEFEKCDVDEFN---------- 302
                :..|   ||.:|  :|||.|..||...|.......|...|:.::.....||
  Fly   307 SSYPKTGI---YSAQEWTSSKVAEWGPKAGHKHAQTSTNDRAKIDLKELQAATFNNKLDFGARGD 368

  Fly   303 LDKQGGTS-SLNVFGSA 318
            .|:..|.. .|.:.|.|
  Fly   369 ADRMSGAGLGLGLTGGA 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4B	NP_001015319.1	RRM_eIF4B	78..159	CDD:409836	16/71 (23%)
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069
		RRM2_hnRNPA_like	137..209	CDD:409766	16/72 (22%)