DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and tial1

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_005156854.1 Gene:tial1 / 394107 ZFINID:ZDB-GENE-040426-1547 Length:399 Species:Danio rerio


Alignment Length:225 Identity:44/225 - (19%)
Similarity:76/225 - (33%) Gaps:64/225 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PFIAYINNLPFDANEDDLYEFFEGIN-LISLRLPREDGENGR-----SRGFG-----------YV 126
            |...|:.||..|..|:.:.:.|..|. ..|.::..|..::.|     |.||.           :|
Zfish     7 PKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDSSRKMNSSSIGFSVLQHTSNDPYCFV 71

  Fly   127 E-LENREDLIHVLSLPDPSIKGRRIRIELSNENDQQSRQKSNR-------------------RFD 171
            | .|:|:....:.::....|.|:.:::..:.....|.:..||.                   .|.
Zfish    72 EFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFA 136

  Fly   172 GFGNNGDNRDSGNWRRDSQNNGSNFGYSSNFERSFNR-----ERKSLPDRDD--VNTPGSW---- 225
            .||...|.|..     .....|.:.||  .|...:|:     .|..:.|.::  |:..|.|    
Zfish   137 PFGKISDARVV-----KDMTTGKSKGY--GFVSFYNKLVRLQYRNRVKDAENAIVHMGGQWLGGR 194

  Fly   226 --------RTSARPQSI-DTSPTRREVEQV 246
                    |....|:|: |.|..:...::|
Zfish   195 QIRTNWATRKPPAPKSVQDNSAKQLRFDEV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 20/97 (21%)
tial1XP_005156854.1 RRM_SF 9..108 CDD:473069 19/98 (19%)
RRM2_TIAR 114..203 CDD:410029 15/95 (16%)
RRM3_TIAR 233..305 CDD:241064
Blue background indicates that the domain is not in the aligned region.

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