DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and hnrnpa1b

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_956398.3 Gene:hnrnpa1b / 378453 ZFINID:ZDB-GENE-030912-14 Length:403 Species:Danio rerio


Alignment Length:137 Identity:32/137 - (23%)
Similarity:62/137 - (45%) Gaps:16/137 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 DDNSIP--HKAPFIAYINNLPFDANEDDLYEFFEGINLISLRLPREDGENGRSRGFGYVELENRE 132
            :|:|.|  |......::..:..|..|:.|.::|:....|.:.....|.:.|..|||.:|..::.:
Zfish    93 EDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHD 157

  Fly   133 DLIHVLSLPDPSIKGR--RIRIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSN 195
            .:..::.....::.|.  .:|..||.:      :.:|....|.|..|.:|  ||:.|    .|:|
Zfish   158 SVDRIVIQKYHTVNGHNCEVRKALSKQ------EMANTGRGGGGGGGGDR--GNFNR----YGNN 210

  Fly   196 FGYSSNF 202
            .||:::|
Zfish   211 GGYNNDF 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 15/82 (18%)
hnrnpa1bNP_956398.3 None

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