DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and LOC1273894

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:XP_061501739.1 Gene:LOC1273894 / 1273894 VectorBaseID:AGAMI1_006469 Length:376 Species:Anopheles gambiae


Alignment Length:351 Identity:76/351 - (21%)
Similarity:122/351 - (34%) Gaps:127/351 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NRIFDDNS---IPHKAPFIAYINNLPFDANEDDLYEFFEGINLISLRLPREDGENGRSRGFGYVE 127
            |..:.|.:   :|.:.|::||:.|||....:.|:...|:...:.|:||.: |.|....:||.|||
Mosquito     9 NNRYGDRARKPLPTEPPYLAYVGNLPNGVVQGDINAIFKEYAVKSVRLVK-DKETDVFKGFCYVE 72

  Fly   128 LENREDLIHVLSL---------PDPSIKGRRIRIELSNENDQQSRQKSNRR----------FDGF 173
            .:..|||..||.|         |:|      :||::: |..:..|...|||          ..|.
Mosquito    73 FDTLEDLEKVLQLDGMIVLNDRPEP------LRIDVA-EQKKNDRGGFNRRGGQQNRGGPGGPGN 130

  Fly   174 GNNGDNRDSGNWRRDSQNN----------------GSNFGYSSNFERSFNRE-RKSLPDRDDVNT 221
            |..|.....|.:.|...|.                |...|.|...:|:::.: .::..||:....
Mosquito   131 GGGGGGGGGGGFNRGGPNQMNNRPIGSGGGGGGGVGGGGGGSGGMDRNYSNDYSRNDYDRNRGGR 195

  Fly   222 PGSWRTSARPQSIDTSPTR---------REVEQVSEKYRE----------------GRVKIADRY 261
            |.::.        |.:|.|         |:.....|..|:                ||....|.|
Mosquito   196 PNNYN--------DRAPNRGRYGNFGDERDGGGRDEWSRDNDRDGGRDGRGGAGGGGRYNDRDNY 252

  Fly   262 SREETSKV--------------------------------EEERPKLNLKPRTLPLPDVKTIEFE 294
            .|::.::.                                .||||:|.|.||:...|        
Mosquito   253 GRDDGNRYGNYGRNNQYRDNDRRKDAAPSNYPPPSNPNLNMEERPRLKLAPRSTNAP-------- 309

  Fly   295 KCDVDEFNLDKQGGTSSLNVFGSAKP 320
               ::.....||    |..:||:|:|
Mosquito   310 ---LNALAETKQ----SAAIFGNARP 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 29/89 (33%)
LOC1273894XP_061501739.1 None

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