DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and Rbm3

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_446148.1 Gene:Rbm3 / 114488 RGDID:620145 Length:156 Species:Rattus norvegicus


Alignment Length:127 Identity:33/127 - (25%)
Similarity:64/127 - (50%) Gaps:4/127 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YINNLPFDANEDDLYEFFEGINLISLRLPREDGENGRSRGFGYVELENREDLIHVL-SLPDPSIK 146
            ::..|.|:.:|..|.:.|.....||..:..:|.|..||||||::...|.|.....: ::...|:.
  Rat     9 FVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLD 73

  Fly   147 GRRIRIELSNENDQQSRQ---KSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSSNFERS 205
            ||:||::.:.::.:.:|.   .::.|...:...|.::..|:.|.||:..|..:||..:.:.|
  Rat    74 GRQIRVDHAGKSARGTRGGAFGAHGRGRSYSRGGGDQGYGSGRYDSRPGGYGYGYGRSRDYS 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 22/76 (29%)
Rbm3NP_446148.1 RRM_CIRBP_RBM3 6..85 CDD:409883 22/75 (29%)

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