DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4B and eif4h

DIOPT Version :10

Sequence 1:NP_001015319.1 Gene:eIF4B / 3355041 FlyBaseID:FBgn0020660 Length:459 Species:Drosophila melanogaster
Sequence 2:NP_001096677.1 Gene:eif4h / 100125209 XenbaseID:XB-GENE-970966 Length:252 Species:Xenopus tropicalis


Alignment Length:284 Identity:72/284 - (25%)
Similarity:113/284 - (39%) Gaps:78/284 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 IPHKAPFIAYINNLPFDANEDDLYEFFEGINLISLRLPREDGENGRSRGFGYVELENREDLIHVL 138
            :|.:.||.||:.||||...:.|:...|:.:::.|:||.| |.|..:.:||.|||.::.:.|...|
 Frog    36 LPTEPPFTAYVGNLPFHVVQGDIDNIFKDLSIRSVRLVR-DKETDKFKGFCYVEFDDLDSLKEAL 99

  Fly   139 SLPDPSIKGRRIRIELSNENDQQSRQKSNRRFDGFGNNG-DNR--DSGNWRRDSQNNGSNFGY-S 199
            :........|.||::::     :.|::....| ||...| |.|  ||....|....:..|.|| .
 Frog   100 TYDGAIFIDRAIRVDIA-----EGRKQDKGGF-GFKKGGPDERGHDSSYGSRGGARDDFNSGYKD 158

  Fly   200 SNFERSFNRERKSLPDRDDVNT------PGSWRTSARPQSIDTSPTRREVEQVSEKYREGRVKIA 258
            .:|.....|..:|.|..|....      ||.:|.:.|..|.|                       
 Frog   159 DDFLGGRGRGGRSGPPGDRRGPPPAGGGPGRYRDAPRGGSAD----------------------- 200

  Fly   259 DRYSREETSKVEEERPKLNLKPRTLPLPDVKTIEFEKCDVDEFNLDKQGGTSSLNVFGSAKPVDT 323
               .||.|.:...:||:|.|||||:..|                |::.....|. :||.|||   
 Frog   201 ---FREPTDEERAQRPRLQLKPRTVATP----------------LNQVANPHSA-IFGGAKP--- 242

  Fly   324 AARELEIEQRLALARKQDKGRREQ 347
                           :::.|::|:
 Frog   243 ---------------REESGKKEK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4BNP_001015319.1 RRM_eIF4B 78..159 CDD:409836 26/80 (33%)
eif4hNP_001096677.1 RRM_eIF4H 37..120 CDD:409835 27/88 (31%)

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