DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNASEK and YPR170W-B

DIOPT Version :9

Sequence 1:NP_001036433.1 Gene:RNASEK / 3355016 FlyBaseID:FBgn0262116 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_001106949.1 Gene:YPR170W-B / 5848745 SGDID:S000028515 Length:85 Species:Saccharomyces cerevisiae


Alignment Length:81 Identity:18/81 - (22%)
Similarity:35/81 - (43%) Gaps:14/81 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 CGLIISVWGIVQLVLMGLFFYINSVALIEDLPLEEEYHSLEDFYAAANRAYNQNAYNCWIAACIY 75
            |..::|.:|:|.|.::...|..|..:.:..:      :..||..|.|:..|        :||.:|
Yeast    12 CCTVLSAFGVVILSVIAHLFNTNHESFVGSI------NDPEDGPAVAHTVY--------LAALVY 62

  Fly    76 VLTLLLSAQQFYMNSR 91
            ::..:....|.|:..|
Yeast    63 LVFFVFCGFQVYLARR 78



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105122
Panther 1 1.100 - - LDO PTHR31733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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