DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and Grk1

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_112358.1 Gene:Grk1 / 81760 RGDID:619712 Length:564 Species:Rattus norvegicus


Alignment Length:560 Identity:197/560 - (35%)
Similarity:293/560 - (52%) Gaps:74/560 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LEAVLADVSYLMAMEK--SKCTPAARASK---KLNLPDPSVRSVMYKYLEKEG-----ELNFHKI 58
            ||.|:|:.:::.|...  ...||::|..|   ||.||..|         :.||     .|.|..:
  Rat     6 LETVVANSAFIAARGSFDGSSTPSSRDKKYLAKLRLPPLS---------KCEGLRDSISLEFDNL 61

  Fly    59 FNE-VLGYLLFKDFCENDSEEPIQQLKFFEQIKLFEKTECYDERKKMARDI-----------YDN 111
            .:| .:|..||:.|.:.| |..:..|:.::.|:.:: |...|.|.:.|:.|           :.|
  Rat    62 CSEQPIGKRLFQQFLKTD-ERHVPALELWKDIEDYD-TADDDLRPQKAQAILAEYLDPQGTLFCN 124

  Fly   112 FIMEEMLSHTYEYSKHAVASVQKYLLKNEVPV----DLFEPYLEEIFTQLKGKPFKKFLESDKFT 172
            |:.:.|           ||.|:      |.|.    .||:|.|:.....|...||:::|.|..|.
  Rat   125 FLDQGM-----------VARVK------EGPTGSQDGLFQPLLQATLEHLSQGPFQEYLGSLYFL 172

  Fly   173 RFCQWKNLELNIQLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLAL 237
            ||.|||.||.. .:..:.|...|::|:||||||..|:...||||||.|.|:|||:|.::|...|:
  Rat   173 RFLQWKWLEAQ-PIGEDWFLDFRVLGKGGFGEVSACQMKATGKMYACKKLNKKRLKKRKGYQGAI 236

  Fly   238 NERNMLQAVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL----SQHGIFSEDEMKFY 298
            .|:.:|..|.:    .|||.:.|||.|...||.::.:|||||:.||:    .::..|.|....:|
  Rat   237 VEKRILAKVHS----RFIVSLAYAFETKTDLCLVMTIMNGGDVRYHIYNVDEENPGFPEPRAIYY 297

  Fly   299 AAEVILGLEHMHKRCIVYRDLKPANILLDENGHIRISDLGLACDF----SKKKPHASVGTHGYMA 359
            .|::|.||||:|:|.||||||||.|:|||.:|:|||||||||.:.    :|.|.:|  ||.|:||
  Rat   298 TAQIISGLEHLHQRRIVYRDLKPENVLLDNDGNIRISDLGLAVELKEGQNKTKGYA--GTPGFMA 360

  Fly   360 PEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPFRQHKTK-DKLEIDKMTLTMNVELPESFSLELK 423
            ||:| :|..||...|:|:.|..||:::....|||....| :..|:.:..::..|:.||.||...|
  Rat   361 PELL-RGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIISEPVKYPEKFSQASK 424

  Fly   424 NLLEMLLQRDVSKRLGCMGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGS 488
            :..|.||::|..||||......|.::.:..|..|.|.|:......||.:|....|.|.:..|:|:
  Rat   425 DFCEQLLEKDPEKRLGFRDGTCDALRANVLFKDISWRQLEAGMLIPPFIPDSRTVYAKNIQDVGA 489

  Fly   489 FDEEDTKGIKLNDADQDLYKMF-SLTISERWQQEVSETVF 527
            |  ...||:..:.||.:.::.| |...|..||:|:.||.|
  Rat   490 F--STVKGVVFDKADTEFFQEFASGNCSIPWQEEMIETGF 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 49/179 (27%)
PKc_like 185..531 CDD:304357 140/353 (40%)
Pkinase 191..454 CDD:278497 115/271 (42%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
Grk1NP_112358.1 N-terminal 1..189 57/211 (27%)
Interaction with RCVRN. /evidence=ECO:0000250|UniProtKB:P28327 1..15 4/8 (50%)
RGS 42..179 CDD:383028 42/164 (26%)
STKc_GRK1 188..475 CDD:270759 121/293 (41%)
C-terminal 456..564 24/74 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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