DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and Grk4

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_017454835.1 Gene:Grk4 / 59077 RGDID:61858 Length:589 Species:Rattus norvegicus


Alignment Length:583 Identity:211/583 - (36%)
Similarity:310/583 - (53%) Gaps:55/583 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAMEKSKCTPAARASKK----LNLPDPSVRSVMYKYLEKEGELNFHKIFN-EV 62
            :||..:|:...|.|  :...|.....|||    |.||..|:.|.:...:||:    |..:.: :.
  Rat     2 ELENFMANTLLLKA--RQGFTKKTGRSKKWRELLKLPPVSMCSDLRHSIEKD----FSSLCDQQP 60

  Fly    63 LGYLLFKDFCENDSEEPIQQLKFFEQIKLFEKTECYDERKKMARDIYDNFIMEEMLSHTYEYSKH 127
            :|.|||:.|| |...:..:.::|.:....:|.| ..:|:::....||..|..|.......:....
  Rat    61 IGRLLFRQFC-NTKPDLKRCIEFLDAAAEYEVT-IEEEQREFGLSIYSRFFKENSEVSLPQIPPD 123

  Fly   128 AVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTMNDFS 192
            .|...:..|.::....::|:.....|:..|..|||:::.||..:.||.|||.||.. .:|.|.|.
  Rat   124 LVKECKCNLKQSSPSQNVFQDCAGVIYKYLSEKPFEEYQESTYYNRFLQWKWLERR-PVTKNTFR 187

  Fly   193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCPFIVC 257
            .:|::|:||||||..|:...||||||.|.|:|||||.::||.:||||:.:|:.:.:    .|:|.
  Rat   188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKLHS----RFVVS 248

  Fly   258 MTYAFHTPDKLCFILDLMNGGDLHYHLSQHGI--FSEDEMKFYAAEVILGLEHMHKRCIVYRDLK 320
            :.|.:.|.|.||.:|.:||||||.||:...|.  |.|....|||||:..|||.:.:..|||||||
  Rat   249 LAYTYETKDALCLVLTIMNGGDLKYHIYNLGNPGFEEQRAVFYAAELCCGLEDLQRERIVYRDLK 313

  Fly   321 PANILLDENGHIRISDLGLACDFSK-KKPHASVGTHGYM--------------APEVLSKGTSYD 370
            |.|||||::|||||||||||.:..: :.....|||.|||              |||::|. ..|.
  Rat   314 PENILLDDHGHIRISDLGLALEIPEGEMVRGRVGTVGYMACVSGFFIKNRVSIAPEIISH-EKYT 377

  Fly   371 SCADWFSFGCMLYKLLKGHSPFRQHKTK-DKLEIDKMTLTMNVELPESFSLELKNLLEMLLQRDV 434
            ...||:..||::|:::.||||||::|.| ::.|:::...|...|..|.||...|::..|||.:|.
  Rat   378 FSPDWWGLGCLIYEMIAGHSPFRKYKEKVNREEMERRVKTETEEYSERFSENAKSICSMLLTKDP 442

  Fly   435 SKRLGCMGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKL 499
            ||||||..:||..||.|..|..|::.::......||..|....:...|..|||.|..  .||:.|
  Rat   443 SKRLGCQSDGASAVKQHPIFKDINFSRLEANMLDPPFCPDPEAIYCKDILDIGQFSV--VKGVNL 505

  Fly   500 NDADQDLYKMFS---LTISERWQQEVSET-VFDTVNTETDK----LEQKRK-----LKQKQHF 549
            :..|:..|..|:   :||.  ||.|:.|: .|..:|...||    || |.|     |:.|::|
  Rat   506 DTNDEIFYTQFATGCVTIP--WQNEMIESGCFKDLNEYEDKGLSPLE-KHKICSCILRPKRNF 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 42/160 (26%)
PKc_like 185..531 CDD:304357 152/367 (41%)
Pkinase 191..454 CDD:278497 127/280 (45%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
Grk4XP_017454835.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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