DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and Grk6

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_113845.2 Gene:Grk6 / 59076 RGDID:61986 Length:589 Species:Rattus norvegicus


Alignment Length:555 Identity:215/555 - (38%)
Similarity:300/555 - (54%) Gaps:57/555 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAME------KSKCTPAARASKK----LNLPDPSVRSVMYKYLEKEGELNFHK 57
            :||.::|:...|.|.|      |.|       |||    |..|..|....:...||::    :|.
  Rat     2 ELENIVANTVLLKAREGGGGNRKGK-------SKKWRQMLQFPHISQCEELRLSLERD----YHS 55

  Fly    58 IF-NEVLGYLLFKDFCENDSEEPIQQLKFFEQIKLFEKTECYDE-RKKMARDIYDNFIMEEMLSH 120
            :. .:.:|.|||::||.. ..|..:...|.:.:..:|.|.  || ||...|.:..||     |||
  Rat    56 LCERQPIGRLLFREFCAT-RPELTRCTAFLDGVAEYEVTP--DEKRKACGRRLMQNF-----LSH 112

  Fly   121 TYEYSKHAVASVQKYLLKN------EVPV-DLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWK 178
            |   ....:..|.:.|:.|      :.|. |||:.........|...||..:|:|..|.||.|||
  Rat   113 T---GPDLIPEVPRQLVSNCAQRLEQGPCKDLFQELTRLTHEYLSMAPFADYLDSIYFNRFLQWK 174

  Fly   179 NLELNIQLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNML 243
            .||.. .:|.|.|..:|::|:||||||..|:...||||||.|.|:|||||.::||.:||||:.:|
  Rat   175 WLERQ-PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238

  Fly   244 QAVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGGDLH---YHLSQHGIFSEDEMKFYAAEVILG 305
            :.|::    .|:|.:.||:.|.|.||.:|.|||||||.   ||:.|.| |.|....|||||:..|
  Rat   239 EKVNS----RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG-FPEARAVFYAAEICCG 298

  Fly   306 LEHMHKRCIVYRDLKPANILLDENGHIRISDLGLACDFSKKKP-HASVGTHGYMAPEVLSKGTSY 369
            ||.:|:..||||||||.|||||::|||||||||||....:.:. ...|||.|||||||: |...|
  Rat   299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV-KNERY 362

  Fly   370 DSCADWFSFGCMLYKLLKGHSPFRQHKTKDKL-EIDKMTLTMNVELPESFSLELKNLLEMLLQRD 433
            ....||::.||:||:::.|.|||:|.|.|.|. |::::...:..|..:.||.:.::|...||.:|
  Rat   363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVAEEYTDRFSPQARSLCSQLLNKD 427

  Fly   434 VSKRLGCMGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIK 498
            .::||||.|.||.|||.|..|..:::.::......||..|....:...|..||..|  ...||:.
  Rat   428 PAERLGCRGGGAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQF--STVKGVD 490

  Fly   499 LNDADQDLYKMFSL-TISERWQQEVSET-VFDTVN 531
            |...|||.|:.|:. ::|..||.|:.|| .|..:|
  Rat   491 LEPTDQDFYQKFATGSVSIPWQNEMVETECFQELN 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 49/168 (29%)
PKc_like 185..531 CDD:304357 156/352 (44%)
Pkinase 191..454 CDD:278497 131/267 (49%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
Grk6NP_113845.2 N-terminal 1..185 59/205 (29%)
RGS 35..179 CDD:295367 46/158 (29%)
STKc_GRK6 185..469 CDD:270779 135/289 (47%)
S_TKc 186..448 CDD:214567 131/267 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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