DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and grk5l

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_005167309.1 Gene:grk5l / 567452 ZFINID:ZDB-GENE-081105-95 Length:584 Species:Danio rerio


Alignment Length:547 Identity:199/547 - (36%)
Similarity:293/547 - (53%) Gaps:42/547 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAMEKSKCTPAARASKK----LNLPDPSVRSVMYKYLEKEGELNFHKIFNEVL 63
            :||.::|:...|.|.|........| |||    |..|..|..:.:.|.:|::......:   :.:
Zfish     2 ELENIVANTVLLKAREGGGGKRKGR-SKKWREILRFPHISQCTELNKAIERDYVCLCER---QPI 62

  Fly    64 GYLLFKDFCENDSEEPIQQLKFFEQIKLFEKTECY----DERKKMARDIYDNFIMEEMLSHTYEY 124
            |.|||:.:||...|  :|:.     |:|.:..:.|    ||::|...|......:.:..|...:.
Zfish    63 GRLLFRLYCETQPE--LQRC-----IQLLDAMDDYEVSPDEKRKSRGDEIIKKFLNKQSSECVDV 120

  Fly   125 SKHAVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTMN 189
            :: ::|...|..|:.....::|....:.:...|.|.||..:..|..|.||.|||.||.. .:|.:
Zfish   121 AE-SLAERCKENLELSPCKEIFSDCRKALHDYLSGAPFTDYQNSMYFDRFLQWKMLERQ-PITKD 183

  Fly   190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCPF 254
            .|..:|::|:||||||..|:...||||||.|.|:|||||.::||.:||||:.:|:.|::    .|
Zfish   184 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS----RF 244

  Fly   255 IVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGI--FSEDEMKFYAAEVILGLEHMHKRCIVYR 317
            :|.:.||:.|.|.||.:|.:||||||.:|:...|.  |.::.::.||||:..|||.:|:..|:||
Zfish   245 VVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGTPGFEKERVQLYAAEICCGLEDLHRESIIYR 309

  Fly   318 DLKPANILLDENGHIRISDLGLACDFSKKKP-----HASVGTHGYMAPEVLSKGTSYDSCADWFS 377
            ||||.|||||:||||||||||||.    |.|     ...|||.|||||||:: ...|....||:.
Zfish   310 DLKPENILLDDNGHIRISDLGLAI----KVPDGEQIRGRVGTVGYMAPEVIN-NERYSMSPDWWG 369

  Fly   378 FGCMLYKLLKGHSPFRQHKTKDKLE-IDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGCM 441
            .||::|::..|.||||..|.:.|.| ::|.......|..:.||.:.|.:..|||.:|..:||||.
Zfish   370 LGCLIYEMTAGRSPFRARKERVKREDVEKRVQEEEEEYSDKFSEDTKAICRMLLSKDPKQRLGCQ 434

  Fly   442 GNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLNDADQDL 506
            .:.|..||.|.||..|::.::......|..||....|...|..||..|  ...||:.|:..|.|.
Zfish   435 TDRASGVKAHPFFKNINFKRLEAGILEPSFVPDPRAVYCKDVLDIEQF--STVKGVNLDQTDNDF 497

  Fly   507 YKMFSL-TISERWQQEVSET-VFDTVN 531
            |..|:. ::|..||.|:.|| .|:.:|
Zfish   498 YSKFATGSVSIPWQNEMIETECFNDLN 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 40/163 (25%)
PKc_like 185..531 CDD:304357 150/355 (42%)
Pkinase 191..454 CDD:278497 124/270 (46%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
grk5lXP_005167309.1 RGS 35..178 CDD:295367 37/153 (24%)
STKc_GRK4_like 184..468 CDD:270756 130/292 (45%)
S_TKc 185..447 CDD:214567 124/270 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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