DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gprk1 and grk1a

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001029353.2 Gene:grk1a / 564152 ZFINID:ZDB-GENE-050823-1 Length:563 Species:Danio rerio


Alignment Length:575 Identity:202/575 - (35%)
Similarity:303/575 - (52%) Gaps:40/575 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LEAVLADVSYLMAMEK--SKCTPAARASK----KLNLPDPSVRSVMYKYLEKEGELNFHKI-FNE 61
            |..|:|:.:|:.|...  ....||:...|    ||.||..:|...:.:.|    :|.|..| ..:
Zfish     6 LTTVVANSAYISARGSFDGTANPASNRDKKYHSKLKLPHITVCEDLRETL----DLQFRSICVEQ 66

  Fly    62 VLGYLLFKDFCE--NDSEEPIQQLKFFEQIKLFEKTECYDERKKMARDIYDNFIMEEMLSHTYEY 124
            .:|..||:::.|  |:.:.|   .:.:..::.::..|..|..:|.|: |...: ||....|...:
Zfish    67 PIGKRLFQEYLETANEYKGP---CRLWRDVEEYDTAEDKDRTQKAAK-ILQRY-MEPSAKHFCPF 126

  Fly   125 -SKHAVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTM 188
             .::.:..|::  ...|...|||...|..:|..||..||..:||:..|.||.|||.||:  |...
Zfish   127 LPENGITKVKE--RHQEAADDLFVEILACVFDFLKEVPFTFYLETMYFKRFLQWKWLEM--QPVA 187

  Fly   189 ND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDC 252
            .| |...|::|:||||||..|:...|||:||.|.|:|||:|.::|...|:.|:.:|..|.:    
Zfish   188 EDWFLDFRVLGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILARVHS---- 248

  Fly   253 PFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL----SQHGIFSEDEMKFYAAEVILGLEHMHKRC 313
            .|||.:.|||.|..:||.::.:||||||.||:    ..:..|||....:|||::|.||||:|::.
Zfish   249 RFIVSLAYAFQTKTELCLVMTIMNGGDLRYHIYNVDENNPGFSEPRACYYAAQIIQGLEHLHQKK 313

  Fly   314 IVYRDLKPANILLDENGHIRISDLGLACDFS--KKKPHASVGTHGYMAPEVLSKGTSYDSCADWF 376
            |:||||||.|:|||..|::||||||||.:.:  ::|.....||.|:||||:| ||..||...|:|
Zfish   314 IIYRDLKPENVLLDNEGNVRISDLGLAVELADGQEKTKGYAGTPGFMAPELL-KGEEYDYSVDYF 377

  Fly   377 SFGCMLYKLLKGHSPFRQHKTK-DKLEIDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGC 440
            :.|..||:.:....|||....| :..|:.|..|...|...|.||...|::.|.||.::|.||||.
Zfish   378 TLGVTLYEFIAAKGPFRTRGEKVENKEVKKRILNDPVTYSEKFSENAKSICEGLLAKEVDKRLGF 442

  Fly   441 MGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLNDADQD 505
            .....||::.|.||..::|.::......||.||....|.|.|..|:|:|  ...||:.|.|.|:.
Zfish   443 KNGTCDEIRTHPFFSQLNWRKLDAGILPPPFVPDSKTVYAKDLDDVGAF--STVKGVCLEDDDKC 505

  Fly   506 LYKMF-SLTISERWQQEVSET-VFDTVNTETDKLEQKRKLKQKQHFDADEKESDC 558
            .:..| |..||..||:|:.|| ::..:|...........|:::...:...|.|.|
Zfish   506 FFDEFASGNISIPWQEEMIETGIYGELNVWGPGGAVPNDLRRESILEQPPKSSTC 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 45/163 (28%)
PKc_like 185..531 CDD:304357 145/355 (41%)
Pkinase 191..454 CDD:278497 116/269 (43%)
PH_GRK2_subgroup 552..675 CDD:269946 3/7 (43%)
PH 559..657 CDD:278594 202/575 (35%)
grk1aNP_001029353.2 RGS 43..180 CDD:295367 38/147 (26%)
STKc_GRK1 189..476 CDD:270759 123/291 (42%)
S_TKc 195..456 CDD:214567 115/265 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.