DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gprk1 and grk5

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001166974.1 Gene:grk5 / 560806 ZFINID:ZDB-GENE-091204-274 Length:588 Species:Danio rerio


Alignment Length:565 Identity:198/565 - (35%)
Similarity:307/565 - (54%) Gaps:50/565 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAMEKSKCTPAARASK-KLNLPDPSVRSVMYKYLEKEGELNFHKI-FNEVLGY 65
            ::|.:.|:.:.|.|.:........|:.| |..|..|.:...  |.||...|.:::.: .|:.:|.
Zfish     2 EIETMAANCALLKARDAGNAYRKGRSRKWKEILHFPHINQC--KELENSIERDYYSLCVNQPIGK 64

  Fly    66 LLFKDFCENDSEEPIQQL-KFFEQIKLFEKTECYDERKKMARDIYDNFIMEEMLSHTYEYSKHAV 129
            .|||.||.  :|..:|.| ...|::..:|.|.  |:.||.:||         .|.:.::.|:.::
Zfish    65 QLFKLFCA--TEPKLQHLIDLLEEMAKYEVTT--DDLKKTSRD---------KLINKFKTSQSSM 116

  Fly   130 A--SVQKYLLKNEVPVDLF----EPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTM 188
            .  .|.|.:....:.::.|    ...|.|   .|.|.||.::..|..|.||.|||.:|.. .:|.
Zfish   117 VREMVHKEMQNGNLNMENFISSCHSALHE---YLSGAPFSEYQNSMYFDRFLQWKMVERR-PVTQ 177

  Fly   189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCP 253
            ::|..:||:|:||||||..|:...:|||||.|.|.|||:|.:.||.:.|.|:.:|:.|::    .
Zfish   178 DNFREYRILGKGGFGEVCACQSRASGKMYACKKLVKKRVKRQGGEKMVLKEKQILERVNS----R 238

  Fly   254 FIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG--IFSEDEMKFYAAEVILGLEHMHKRCIVY 316
            |:|.:.|.:.|.|.||.:|.:|:||||.:|:.:.|  ...::.::||||||:.||:|:||..:||
Zfish   239 FVVSLAYTYETKDSLCLVLTVMDGGDLGFHIYKMGNQKLDKNRVQFYAAEVLCGLDHLHKHNVVY 303

  Fly   317 RDLKPANILLDENGHIRISDLGLACDFSKKK-PHASVGTHGYMAPEVLSKGTSYDSCADWFSFGC 380
            |||||.|||||..|||||||||||....:.| ....|||.|||||||:: ||||....||:..||
Zfish   304 RDLKPENILLDYEGHIRISDLGLAEILPENKLVKGRVGTAGYMAPEVVA-GTSYGVSVDWWGLGC 367

  Fly   381 MLYKLLKGHSPFRQHKTK-DKLEIDKMTLTMNVEL-PESFSLELKNLLEMLLQRDVSKRLGC-MG 442
            ::|::.....|||.||.: .|.::::..|. .||| .:.|..|.:|:.:.||.::..:|||| .|
Zfish   368 LIYEMTAKKPPFRNHKEQISKKDLEQRILE-KVELYDKMFDEETQNICQKLLAKNPKERLGCRSG 431

  Fly   443 NGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLNDADQDLY 507
            .||:.:|.|.||..|::..:......||.:|....:...|..||..|  ...||:.|::||:..|
Zfish   432 QGAEVIKSHQFFKNINFTLLEAGMMQPPFIPDPRAIYCDDVSDIDQF--AAVKGVTLDEADEAFY 494

  Fly   508 KMFSL-TISERWQQEVSET-------VFDTVNTETDKLEQKRKLK 544
            ..|:. :::..||.|:.||       ||....|.:..|::..:::
Zfish   495 AEFNTGSVTVPWQTEMIETECFKDLNVFGPHGTRSQDLDRSEQIQ 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 45/164 (27%)
PKc_like 185..531 CDD:304357 146/359 (41%)
Pkinase 191..454 CDD:278497 121/268 (45%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
grk5NP_001166974.1 RGS 35..173 CDD:295367 42/155 (27%)
PKc_like 180..464 CDD:304357 127/289 (44%)
S_TKc 180..443 CDD:214567 121/268 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0986
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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