DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and grk4

DIOPT Version :10

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001349548.1 Gene:grk4 / 560761 ZFINID:ZDB-GENE-060929-1198 Length:579 Species:Danio rerio


Alignment Length:540 Identity:197/540 - (36%)
Similarity:302/540 - (55%) Gaps:27/540 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAMEKSKCTPAARASK---KLNLPDPSVRSVMYKYLEKEGELNFHKIFNEVLG 64
            ::|.::|:...|.|.|........|:.|   .|.||..|....:.:.:|::......|   :.:|
Zfish     2 EIENIVANTVLLKAREGGGGKRNGRSKKWKEMLKLPHISQCEELRRTIERDYTSLCEK---QPIG 63

  Fly    65 YLLFKDFCENDSEEPIQQ-LKFFEQIKLFEKTECYDERKKMA-RDIYDNFIMEEMLSHTYEYSKH 127
            ..||:.||  |::..::: ::|.:.:.:::...  ||:::.| .:|.|.:......:|..|.::.
Zfish    64 RQLFRQFC--DTQPKLRRCIEFLDSVAMYQVAP--DEKRRDAGLNILDTYFNNGSAAHLPEMAQD 124

  Fly   128 AVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTMNDFS 192
            .|...::.|.::... :||:.....:...|.|.||..:.|:..|:||.|||.||.. .:|.|.|.
Zfish   125 VVGECRQKLEQSPCK-ELFQECTRIVREYLSGAPFSAYQETMYFSRFLQWKWLERQ-PVTKNTFR 187

  Fly   193 VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCPFIVC 257
            .:|::|:||||||..|:...||||||.|.|:|||:|.::||.:||||:.:|:.|::.    |:|.
Zfish   188 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRVKKRKGEAMALNEKRILEKVNSS----FVVS 248

  Fly   258 MTYAFHTPDKLCFILDLMNGGDLHYHLSQHGIFSEDEMK--FYAAEVILGLEHMHKRCIVYRDLK 320
            :.||:.|.|.||.:|.:||||||.:|:...|....||.:  |||||:..|||.:|:..|||||||
Zfish   249 LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNSGFDEQRAIFYAAEICCGLEDLHRERIVYRDLK 313

  Fly   321 PANILLDENGHIRISDLGLACDFSKKKP-HASVGTHGYMAPEVLSKGTSYDSCADWFSFGCMLYK 384
            |.|||||:.|||||||||||....:.:. ...|||.|||||||: :..||....||:..||::|:
Zfish   314 PENILLDDRGHIRISDLGLAVQIPEGETIRGRVGTVGYMAPEVI-QNESYTFSPDWWGLGCLIYE 377

  Fly   385 LLKGHSPFRQHKTKDKL-EIDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGCMGNGADEV 448
            :::|.||||:.|.:.|. |:|:.......|..|.||.:.|::...||.:|..:||||.|:||.||
Zfish   378 MIQGQSPFRRRKERVKREEVDRRVCEDQEEYTEKFSEDAKDICRQLLCKDPKERLGCRGSGAAEV 442

  Fly   449 KMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLNDADQDLY-KMFSL 512
            |:|..|..|::.::......||..|....|...|..||..|  ...||:.|:..|.|.| |..:.
Zfish   443 KLHPIFRNINFKRLEANMLDPPFCPDPRAVYCKDVLDIEQF--STVKGVNLDPTDDDFYHKFVTG 505

  Fly   513 TISERWQQEVSE-TVFDTVN 531
            ::|..||.|:.| ..|..:|
Zfish   506 SVSIPWQNEMIEMECFKEIN 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 38/160 (24%)
Protein Kinases, catalytic domain 185..531 CDD:473864 152/351 (43%)
PH_GRK2_subgroup 552..675 CDD:269946
grk4NP_001349548.1 RGS_GRK4 52..183 CDD:188704 32/139 (23%)
Protein Kinases, catalytic domain 185..469 CDD:473864 132/288 (46%)
Blue background indicates that the domain is not in the aligned region.

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