DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and grk1b

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001017711.2 Gene:grk1b / 550406 ZFINID:ZDB-GENE-050417-211 Length:559 Species:Danio rerio


Alignment Length:570 Identity:190/570 - (33%)
Similarity:293/570 - (51%) Gaps:85/570 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LEAVLADVSYLMAMEKSKCTPAARAS-------KKLNLP----------------------DPSV 39
            ||.|:|:.:|:.|  :.....||.|:       .|||||                      .|..
Zfish     6 LETVVANSAYVSA--RGSIDGAAAATMRDKKYRSKLNLPHIRQCEQMKTIVDTSFDSMCVRQPIG 68

  Fly    40 RSVMYKYLEKEGEL-NFHKIFNEVLGYLLFKDFCENDSEEPIQQL--KFFEQIKLFEKTECYDER 101
            :.:..:|||.|.:. |...::.::..|::.:   |||..:..|::  |::|.   ..|..|    
Zfish    69 KRLFQQYLESEADYKNPVDLWKDIEDYIVAQ---ENDRAKKAQKIVNKYYES---SSKNFC---- 123

  Fly   102 KKMARDIYDNFIMEEMLSHTYEYSKHAVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFL 166
                     :|:.::.:|...|..|:             :..|||:...:::...|:.|....|.
Zfish   124 ---------DFLGDKAVSRVKEDFKN-------------IRGDLFKESEQQLLVHLEAKALTGFK 166

  Fly   167 ESDKFTRFCQWKNLELNIQLTMND-FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK 230
            :|..|.|:.|:|.||  .|....| |...|::|:||||||:.|:...||||||.|.|:|||:|.:
Zfish   167 DSMYFLRYVQFKWLE--SQPVAEDWFMDFRVLGKGGFGEVHACQMKATGKMYANKKLNKKRLKKR 229

  Fly   231 QGEMLALNERNMLQAVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL----SQHGIFS 291
            :|...|:.|:.:|..|.:    .|||.:.|||.|...||.::.:||||||.:|:    .::..|:
Zfish   230 KGYDGAIIEKRILAKVHS----RFIVTLAYAFQTKTDLCLVMTIMNGGDLRFHMYNVDEKNPGFN 290

  Fly   292 EDEMKFYAAEVILGLEHMHKRCIVYRDLKPANILLDENGHIRISDLGLACDF--SKKKPHASVGT 354
            |....:|.|::|.||||:|:..||||||||.|:|||:.||:|:||||||.:.  .|.|.....||
Zfish   291 ETRACYYTAQIICGLEHLHQHRIVYRDLKPENVLLDDAGHVRLSDLGLAVELPPGKDKTQGYAGT 355

  Fly   355 HGYMAPEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPFR-QHKTKDKLEIDKMTLTMNVELPESF 418
            .|:||||:|.| ..||...|:|:.|..||:::....||| :.:..|..|:.:..|...|..|.:|
Zfish   356 PGFMAPELLQK-KEYDYTVDYFTLGVTLYEMVAAKGPFRCRGEQVDNNEVTRRILNDPVSYPPTF 419

  Fly   419 SLELKNLLEMLLQRDVSKRLGCMGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADA 483
            |.|||:|.|.|:::|..||||...|...|:|..:||..::|.::......||.||....|.|.|.
Zfish   420 SQELKDLCEGLMEKDPEKRLGFKNNECAELKNQSFFKELNWGRLEAGMLPPPFVPDPKMVYAKDI 484

  Fly   484 FDIGSFDEEDTKGIKLNDADQDLYKMFSL-TISERWQQEVSET-VFDTVN 531
            .|:|:|  ...||:.:::.|.:.|..|:. .:...||:|:.|| ||..:|
Zfish   485 DDVGAF--STVKGVVIDNKDDEFYTEFATGNVPIPWQEEMIETGVFGELN 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 37/180 (21%)
PKc_like 185..531 CDD:304357 143/355 (40%)
Pkinase 191..454 CDD:278497 116/269 (43%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
grk1bNP_001017711.2 RGS_GRK1 42..179 CDD:188702 30/168 (18%)
PKc_like 188..475 CDD:304357 123/291 (42%)
S_TKc 194..455 CDD:214567 115/265 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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