DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk1 and grk4

DIOPT Version :9

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001006112.1 Gene:grk4 / 448587 XenbaseID:XB-GENE-480159 Length:575 Species:Xenopus tropicalis


Alignment Length:566 Identity:214/566 - (37%)
Similarity:308/566 - (54%) Gaps:36/566 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLEAVLADVSYLMAMEKSKCTPAARASK---KLNLPDPSVRSVMYKYLEKE-GELNFHKIFNEVL 63
            ::|.::|:...|.|.|........|:.|   .|.||..|....:...:|:: |.|    ...:.:
 Frog     2 EIENIVANTVLLKAREGGGGKRNGRSKKWKEMLRLPHISQCEELRHTIERDYGNL----CEKQPI 62

  Fly    64 GYLLFKDFCENDSEEPIQQ-LKFFEQIKLFEKTECYDE-RKKMARDIYDNFIMEEMLSHTYEYSK 126
            |.|||:.||  |:...::: ::|.:.:..:|...  || ||.....|.|.:......:|..|..:
 Frog    63 GRLLFRQFC--DTRPELKRCIEFLDAVAEYELAP--DEKRKDHGLRILDTYFNNGSAAHLPEIPQ 123

  Fly   127 HAVASVQKYLLKNEVPVDLFEPYLEEIFTQLKGKPFKKFLESDKFTRFCQWKNLELNIQLTMNDF 191
            ..|...::.|.::... :||:.....:...|.|.||..|.:|..|:||.|||.||.. .:|.|.|
 Frog   124 DTVHECKEKLEQSPCK-ELFKDCTRVVHDYLSGTPFGDFQDSMYFSRFLQWKWLERQ-PVTKNTF 186

  Fly   192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCPFIV 256
            ..:|::|:||||||..|:...||||||.|.|:|||||.::||.:||||:.:|:.|::    .|:|
 Frog   187 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS----RFVV 247

  Fly   257 CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGI--FSEDEMKFYAAEVILGLEHMHKRCIVYRDL 319
            .:.|.:.|.|.||.:|.:||||||.:|:...|.  |.|....|||||:..|||.:.:..||||||
 Frog   248 SLAYTYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAVFYAAELCCGLEDLQRERIVYRDL 312

  Fly   320 KPANILLDENGHIRISDLGLACDFSK-KKPHASVGTHGYMAPEVLSKGTSYDSCADWFSFGCMLY 383
            ||.|||||:.|||||||||||....: :.....|||.|||||||:: ..||....||:..||::|
 Frog   313 KPENILLDDRGHIRISDLGLAVQIPEGESIRGRVGTVGYMAPEVIN-NESYTFSPDWWGLGCLVY 376

  Fly   384 KLLKGHSPFRQHKTKDKL-EIDKMTLTMNVELPESFSLELKNLLEMLLQRDVSKRLGCMGNGADE 447
            ::::|.||||:.|.|.|. |:|:.......|..|.||.:.|::..|||.:|..:||||.|:||..
 Frog   377 EMIQGQSPFRKRKEKVKRDEVDRRVREDEEEYSEKFSEDAKSICRMLLSKDPKQRLGCTGSGASH 441

  Fly   448 VKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTKGIKLNDADQDLYKMF-S 511
            ||.|..|..|::.::......||.||....|...|..||..|  ...||:.|:..|.|.|..| :
 Frog   442 VKQHPIFKNINFKRLEANILEPPFVPDPRAVYCKDVLDIEQF--STVKGVNLDTTDDDFYSKFVT 504

  Fly   512 LTISERWQQEVSET-VFDTVNT-ETD-----KLE-QKRKLKQKQHF 549
            .::|..||||:.|| .|..:|. |||     .|: .|:.||.|:.|
 Frog   505 GSVSIPWQQEMIETECFKDINVYETDGCLSPDLDVSKQNLKPKRSF 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 43/161 (27%)
PKc_like 185..531 CDD:304357 155/351 (44%)
Pkinase 191..454 CDD:278497 127/266 (48%)
PH_GRK2_subgroup 552..675 CDD:269946
PH 559..657 CDD:278594
grk4NP_001006112.1 RGS_GRK4 52..183 CDD:188704 37/140 (26%)
STKc_GRK4 185..469 CDD:173720 133/288 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1104340at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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