DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gprk1 and rsks-1

DIOPT Version :10

Sequence 1:NP_001036438.1 Gene:Gprk1 / 3355013 FlyBaseID:FBgn0260798 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_499447.2 Gene:rsks-1 / 176554 WormBaseID:WBGene00012929 Length:550 Species:Caenorhabditis elegans


Alignment Length:407 Identity:136/407 - (33%)
Similarity:209/407 - (51%) Gaps:47/407 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 HTYEYSKHAVASVQKYLLKNEVPVDLFEP-----YLEEIFTQLKGKPFKKFLESDKFTRFCQWKN 179
            |.|.|..........::..|.....:..|     |:|:           ..:||   .:.|....
 Worm    21 HAYHYDNCTEIMEDDHMYSNVADGQISAPPPSSSYMED-----------PMMES---IQLCASAI 71

  Fly   180 LELNIQLTMNDFSVHRIIGRGGFGEVYGCRK---ADTGKMYAMKCLDKKRIKMKQGEMLALN-ER 240
            ...|:::...||.:.:::|:||:|:|:..||   :|.|:::|||.|.|..|...|.:..... ||
 Worm    72 NPPNVRVGPEDFQLLKVLGKGGYGKVFQVRKTTGSDNGQIFAMKVLQKATIVRNQKDTAHTKAER 136

  Fly   241 NMLQAVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGIFSEDEMKFYAAEVILG 305
            |:|:||.:    |||..:.|||.|..||..||:.::||:|..||.:.|:|.|:..|||.:|:::.
 Worm   137 NILEAVKS----PFICDLLYAFQTGGKLYLILEYLSGGELFMHLEREGMFMENVAKFYLSEIVVS 197

  Fly   306 LEHMHKRCIVYRDLKPANILLDENGHIRISDLGLACD--FSKKKPHASVGTHGYMAPEVLSKGTS 368
            |||:|::.|:||||||.|||||..||::::|.||..:  ...:|.|...||..|||||:|.: ..
 Worm   198 LEHLHQQGIIYRDLKPENILLDAYGHVKLTDFGLCKEEIEGDQKTHTFCGTIEYMAPEILMR-CG 261

  Fly   369 YDSCADWFSFGCMLYKLLKGHSPF---RQHKTKDKLEIDKMTLTMNVELPESFSLELKNLLEMLL 430
            :....||:|.|.:::.:|.|..||   .:.||.||:...::|      ||...|.|.::|::.||
 Worm   262 HGKAVDWWSLGALMFDMLTGGPPFTAENRRKTIDKILKGRLT------LPAYLSNEARDLIKKLL 320

  Fly   431 QRDVSKRLGCMGNGADEVKMHNFFCGIDWHQVYIQKYTPPLVPPRGEVNAADAFDIGSFDEEDTK 495
            :|.|..|||...:.|:|:|.|.||...||:.||.::...|..|     |..:..|...||...| 
 Worm   321 KRHVDTRLGAGLSDAEEIKSHAFFKTTDWNLVYARQLEAPFKP-----NIENDEDTSLFDARFT- 379

  Fly   496 GIKLNDADQDLYKMFSL 512
              |:...|......|||
 Worm   380 --KMTPVDSPCETNFSL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk1NP_001036438.1 RGS_GRK2_GRK3 30..186 CDD:188701 11/70 (16%)
Protein Kinases, catalytic domain 185..531 CDD:473864 125/337 (37%)
PH_GRK2_subgroup 552..675 CDD:269946
rsks-1NP_499447.2 STKc_p70S6K 86..408 CDD:270736 123/328 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.