DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17683 and Ciao3

DIOPT Version :10

Sequence 1:NP_001036428.1 Gene:CG17683 / 3355011 FlyBaseID:FBgn0262115 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001013201.1 Gene:Ciao3 / 360496 RGDID:1305982 Length:476 Species:Rattus norvegicus


Alignment Length:484 Identity:232/484 - (47%)
Similarity:322/484 - (66%) Gaps:18/484 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRLSRALQLTDIDDFITPSQICIKPVQIDKARSKTGAKIKIKGDGC-FEESESG-NLKLNKVDIS 64
            |..|.||||||:||||.|||.|||||.:.|......|||.|:.||. |:.:..| :.||.|..:|
  Rat     3 SPFSGALQLTDLDDFIGPSQSCIKPVTVAKKPGSGIAKIHIEDDGSYFQVNPDGRSQKLEKAKVS 67

  Fly    65 LQDCLACSGCITSAEEVLITQQSREELLKVLQENSKNKASEDWDNVRTIVFTLATQPILSLAYRY 129
            |.||||||||:||||.:||||||.|||.|||..|......:.    |.:|.:::.|...|||.|:
  Rat    68 LNDCLACSGCVTSAETILITQQSHEELRKVLDANKVAAPGQQ----RLVVVSVSPQSRASLAARF 128

  Fly   130 QIGVEDAARHLNGYFRSLGADYVLSTKVADDIALLECRQEFVDRYRENEN----LTMLSSSCPGW 190
            |:...|.||.|..:|:.:|..:|..|..|.:.:|||.::|||.|:||..|    |.||:|:||||
  Rat   129 QLDSTDTARKLTSFFKKIGVHFVFDTAFARNFSLLESQKEFVQRFREQANSREALPMLASACPGW 193

  Fly   191 VCYAEKTHGNFLLPYVSTTRSPQQIMGVLVKQILADKMNVPASRIYHVTVMPCYDKKLEASREDF 255
            :||||||||||:|||:||.|||||:||.|:|...|.:..:...:||||||||||||||||||.||
  Rat   194 ICYAEKTHGNFILPYISTARSPQQVMGSLIKDFFAQQQLLTPDKIYHVTVMPCYDKKLEASRPDF 258

  Fly   256 FSKANNSRDVDCVITSVEVEQLLSEAQQPLSQYDLLDLDWPWSNVRPEFMVWAHEKTLSGGYAEH 320
            |::...:||||||:|:.||.:||.|....||:.:.:.||....:|..|... :|....||||.||
  Rat   259 FNQEYQTRDVDCVLTTGEVFRLLEEEGVSLSELEPVPLDGLTRSVSAEEPT-SHRGGGSGGYLEH 322

  Fly   321 IFKYAAKHIFNEDLKTELEFKQLKNRDFREIILKQNGKTVLKFAIANGFRNIQNLVQKLKREKVS 385
            :|::||:.:|...: .::.::.::|:||:|:.|::.|:.:|:||:|.||||||||||||||.:..
  Rat   323 VFRHAAQELFGIHV-ADVTYQPMRNKDFQEVTLEREGQVLLRFAVAYGFRNIQNLVQKLKRGRCP 386

  Fly   386 NYHFVEVMACPSGCINGGAQIR-PTTGQHVRELTRKLEELYQNLPRSEPENSL-TKHIYNDFLDG 448
             ||:||||||||||:|||.|:: |.|  ..|||.:::|.||..:....||::. .:.:|..:|.|
  Rat   387 -YHYVEVMACPSGCLNGGGQLKAPDT--EGRELLQQVERLYSMVRTEAPEDAPGVQELYQHWLQG 448

  Fly   449 FQSDKSYDVLHTRYHDVVSELSISLNINW 477
            ..|:::..:|||:|| .|.:::..|:|.|
  Rat   449 EDSERASHLLHTQYH-AVEKINSGLSIRW 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17683NP_001036428.1 Fe_hyd_lg_C 111..403 CDD:397172 147/295 (50%)
Fe_hyd_SSU 419..465 CDD:214899 14/46 (30%)
Ciao3NP_001013201.1 Fe_hyd_lg_C 112..403 CDD:397172 146/293 (50%)
Fe_hyd_SSU 418..466 CDD:214899 14/48 (29%)

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