DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17168 and Snip1

DIOPT Version :9

Sequence 1:NP_001015254.1 Gene:CG17168 / 3354996 FlyBaseID:FBgn0039943 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_780455.2 Gene:Snip1 / 76793 MGIID:2156003 Length:383 Species:Mus musculus


Alignment Length:429 Identity:178/429 - (41%)
Similarity:230/429 - (53%) Gaps:81/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQRNKEHELEQQRTGHEGD----TKMSDRNLSKTKKIKQRATADSSSSSDSSNESKKSNH---SS 60
            |....|.|...:|....||    ..:....||......:|..|.::|.|..:.|...|.|   .:
Mouse     2 KAGKSERERSGRRRHRSGDALTTVVVKQERLSPEPVAHRRPDAPAASLSPPAAEPGHSGHRGSRA 66

  Fly    61 LSP-NRKQRTAGKRQRDSSQSQEKRHKQLTHPSEDVHEQRSKWDSPERSNSHRNSTRQRRNTRSR 124
            .|| .:|.:::|:|   |...:.||.:...:|...|.::|.  |.|.|....|           :
Mouse    67 RSPAKKKSKSSGRR---SKSPRTKRSQSPHYPMVKVKQERE--DHPRRGREDR-----------Q 115

  Fly   125 SRERSERERDRDCERNKERDYNMQSSKERWQRSPALRHRSRSSERKNRERDRQRRPTERRPVRRS 189
            .||.||:|..|  .||.|||                |||..|         ||.|.::.|||  |
Mouse   116 HREPSEQEHRR--ARNSERD----------------RHRGHS---------RQGRSSDERPV--S 151

  Fly   190 QSPRDRCHGG-------RDLDQRRQRNQRHNNSNKNEDDHYVWGKEVDEKVP-----AENDVPVD 242
            ...|||....       ||....|:|..|..|.:.        |.|..|.:|     ...:||| 
Mouse   152 GQDRDRDSQNLQAQEEERDFHNARRREHRQQNESA--------GSEAQEVIPRPAGNRSKEVPV- 207

  Fly   243 KEKPNFGLSGALTEDTNKLNGVVVKYSEPPEARKPKRRWRLYPFKGETALPTLHIHRQSCFLVGR 307
            ||||:|.|||||.||||...|||:|||||||||.||:||||||||.:..||.::|||||.:|:||
Mouse   208 KEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGR 272

  Fly   308 DRKVVDLAVDHPSCSKQHAALQYRLVPFEREDGSHGKRVRLYLIDLDSANGTFLNNKKIDARKYY 372
            .|::.|:.:||||||||||..|||||.:.|.||:.|:||:.|:|||.|.||||||||:|:.::||
Mouse   273 HRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYY 337

  Fly   373 ELIEKDVIKFGFSSREYVLLHENS-------KEDQEDDD 404
            ||.||||:||||||||||||||:|       |||::|::
Mouse   338 ELKEKDVLKFGFSSREYVLLHESSDTSELDRKEDEDDEE 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17168NP_001015254.1 FHA 280..395 CDD:238017 76/114 (67%)
FHA <294..411 CDD:224630 72/118 (61%)
Snip1NP_780455.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..209 68/260 (26%)
FHA 245..360 CDD:238017 76/114 (67%)
FHA <262..353 CDD:224630 59/90 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 359..383 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837989
Domainoid 1 1.000 131 1.000 Domainoid score I5171
eggNOG 1 0.900 - - E1_KOG1882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 271 1.000 Inparanoid score I2990
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52032
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004489
OrthoInspector 1 1.000 - - oto94123
orthoMCL 1 0.900 - - OOG6_102703
Panther 1 1.100 - - LDO PTHR23308
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2234
SonicParanoid 1 1.000 - - X4267
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.