DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17168 and snip1

DIOPT Version :9

Sequence 1:NP_001015254.1 Gene:CG17168 / 3354996 FlyBaseID:FBgn0039943 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_988890.1 Gene:snip1 / 394485 XenbaseID:XB-GENE-481343 Length:370 Species:Xenopus tropicalis


Alignment Length:419 Identity:162/419 - (38%)
Similarity:237/419 - (56%) Gaps:60/419 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NKEHELEQQRTGHEGDT-KMSDRNLSKTKKIKQRATADSSSSSDSSNESKKSNHSSLSPN-RKQR 68
            |:|.:..::|..|..:| .:....:|..::.:.|.|....||...|....:....|.||: ||.:
 Frog     2 NEEDDRGRKRRPHSPETVTIKQERISPVRQHRTRRTPSPRSSDGGSPHRHQGRRRSRSPSKRKNK 66

  Fly    69 TAGKRQRDSSQSQEKRHK--QLTHPSEDVHEQRSKWDSPERSNSHRNSTRQRRNTRSRSRERSER 131
            ::.||   |...::|||:  ..:.|...|..::.|.:..:|....|..|.:.:....|:|.|.:.
 Frog    67 SSVKR---SKSPKKKRHRSDSRSPPPLGVKIKQEKIEHSQRPYKERQRTERGQEDHRRNRHRDQA 128

  Fly   132 ERDRDCERNKERDYNMQSSKERWQRSPALRHRSRSSERKNRERDRQRRPTERRPVRRSQSPRDRC 196
            ::||         ||...:::|.|               |||....|...|.|....        
 Frog   129 DQDR---------YNHPRARDREQ---------------NREEQNLREQREEREFYN-------- 161

  Fly   197 HGGRDLDQRRQRNQRHNNSNKNEDDHYVWGKEVDEKVPAENDVPVDKEKPNFGLSGALTEDTNKL 261
                  ::||:|.|:::.:.:.:.:      :||:.....:   .:||||||.|||||.||||..
 Frog   162 ------ERRRERRQQNDQAEEEQTE------DVDDSTDKGD---ANKEKPNFELSGALLEDTNTF 211

  Fly   262 NGVVVKYSEPPEARKPKRRWRLYPFKGETALPTLHIHRQSCFLVGRDRKVVDLAVDHPSCSKQHA 326
            .|||:|||||||||.||:||||||||.:.|||.::|||||.:|:||.|::.|:.:||||||||||
 Frog   212 RGVVIKYSEPPEARTPKKRWRLYPFKNDEALPVMYIHRQSAYLLGRQRRIADIPIDHPSCSKQHA 276

  Fly   327 ALQYRLVPFEREDGSHGKRVRLYLIDLDSANGTFLNNKKIDARKYYELIEKDVIKFGFSSREYVL 391
            .||||:|.|.|.:|:.|:|||.|:|||.|.|||:|||::|:.::||||.||||:||||||||||:
 Frog   277 VLQYRMVQFTRANGTSGRRVRPYIIDLGSGNGTYLNNQRIEPQRYYELKEKDVLKFGFSSREYVV 341

  Fly   392 LHENS------KEDQEDDDVHIKDEPHDA 414
            |||:|      |:..:|||...:||..|:
 Frog   342 LHESSDTSEVDKKQDDDDDEDEEDEGTDS 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17168NP_001015254.1 FHA 280..395 CDD:238017 75/114 (66%)
FHA <294..411 CDD:224630 71/122 (58%)
snip1NP_988890.1 Rho 6..>190 CDD:333130 47/230 (20%)
FHA 230..345 CDD:238017 75/114 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5550
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 264 1.000 Inparanoid score I2998
OMA 1 1.010 - - QHG52032
OrthoDB 1 1.010 - - D955935at2759
OrthoFinder 1 1.000 - - FOG0004489
OrthoInspector 1 1.000 - - oto104331
Panther 1 1.100 - - LDO PTHR23308
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4267
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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