DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17168 and Snip1

DIOPT Version :9

Sequence 1:NP_001015254.1 Gene:CG17168 / 3354996 FlyBaseID:FBgn0039943 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001014091.1 Gene:Snip1 / 313588 RGDID:1359268 Length:389 Species:Rattus norvegicus


Alignment Length:440 Identity:177/440 - (40%)
Similarity:234/440 - (53%) Gaps:87/440 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KQRNKEHELEQQRTGHEGD----TKMSDRNLSKTKKIKQRATADSSSSSDSSNESKKSNH----- 58
            |....|.|...:|....||    ..:....||......:|..|.::|....:.||..:.|     
  Rat     2 KAGKSERERSSRRRHRSGDALATVVVKQERLSPEPVAHRRPDAPAASPPPPAAESGSAGHRGSRA 66

  Fly    59 --SSLSP-NRKQRTAGKRQRDSSQSQEKRHKQLTHPSEDVHEQRSKWDSPERSNSHRNSTRQRRN 120
              :|.|| .:|.:::|:|   |...:.||.:...:.:..|.::|.  |.|.|....|        
  Rat    67 RGASRSPAKKKSKSSGRR---SKSPRTKRSRSPHYSTVKVKQERE--DHPRRGREDR-------- 118

  Fly   121 TRSRSRERSERERDRDCERNKERDYNMQSSKERWQRSPALRHRSRSSERKNRERDRQRRPTERRP 185
               :.||.||:|..|  .||.|||                |||..:         ||||.::.||
  Rat   119 ---QHRELSEQEHRR--ARNSERD----------------RHRGHA---------RQRRSSDERP 153

  Fly   186 VRRSQSPRDR-------CHGGRDLDQRRQRNQRHNNSNKNEDDHYVWGKEVDEKVP-----AEND 238
            |  |...|||       ....||.:..|:|..|..|.:.        |.|..|.:|     ...:
  Rat   154 V--SGQGRDRDSQILQAQEEERDFNNARRREHRQQNESA--------GAEAQEVIPRPAGNKNKE 208

  Fly   239 VPVDKEKPNFGLSGALTEDTNKLNGVVVKYSEPPEARKPKRRWRLYPFKGETALPTLHIHRQSCF 303
            ||| ||||:|.|||||.||||...|||:|||||||||.||:||||||||.:..||.::|||||.:
  Rat   209 VPV-KEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAY 272

  Fly   304 LVGRDRKVVDLAVDHPSCSKQHAALQYRLVPFEREDGSHGKRVRLYLIDLDSANGTFLNNKKIDA 368
            |:||.|::.|:.:||||||||||..|||||.:.|.||:.|:||:.|:|||.|.||||||||:|:.
  Rat   273 LLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEP 337

  Fly   369 RKYYELIEKDVIKFGFSSREYVLLHENS---------KEDQEDDDVHIKD 409
            ::||||.||||:||||||||||||||:|         .||:|:::..:.|
  Rat   338 QRYYELKEKDVLKFGFSSREYVLLHESSDTSELDRKEDEDEEEEEEMVSD 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17168NP_001015254.1 FHA 280..395 CDD:238017 76/114 (67%)
FHA <294..411 CDD:224630 72/125 (58%)
Snip1NP_001014091.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..212 67/263 (25%)
FHA 249..364 CDD:238017 76/114 (67%)
FHA <266..357 CDD:224630 59/90 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..389 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341767
Domainoid 1 1.000 130 1.000 Domainoid score I5066
eggNOG 1 0.900 - - E1_KOG1882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 269 1.000 Inparanoid score I2939
OMA 1 1.010 - - QHG52032
OrthoDB 1 1.010 - - D955935at2759
OrthoFinder 1 1.000 - - FOG0004489
OrthoInspector 1 1.000 - - oto97645
orthoMCL 1 0.900 - - OOG6_102703
Panther 1 1.100 - - LDO PTHR23308
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4267
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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