DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17168 and Slc4a1ap

DIOPT Version :9

Sequence 1:	NP_001015254.1	Gene:	CG17168 / 3354996	FlyBaseID:	FBgn0039943	Length:	421	Species:	Drosophila melanogaster
Sequence 2:	XP_038967837.1	Gene:	Slc4a1ap / 298805	RGDID:	1307080	Length:	738	Species:	Rattus norvegicus

Alignment Length:	205	Identity:	64/205 - (31%)
Similarity:	86/205 - (41%)	Gaps:	39/205 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly   229 VDEKVPAEN-DVPVD--KEKPNFGLSGALTE--------DTNKLNGVVVK--------------- 267
            |..|.||.: .||.|  ||.....|.....|        |:.:..|..|:
  Rat    31 VRSKAPASSPSVPEDVKKECSTAQLDSGCGEPEVSPPQPDSEETGGPPVEQLRSPRVAPASGGPT 95

  Fly   268 ----YSEPPEARKPKRRWRLYPFKGETALPTLHIHRQSCFLVGRDRKVVDLAVDHPSCSKQHAAL 328
                |.||.........:.|...||.|.|.|..:...|..|.|| ....|:.::|||.|:.||.|
  Rat    96 RAPPYQEPSWGSPATAPYSLETLKGGTILGTRTLKDTSYCLFGR-LASCDICLEHPSVSRYHAVL 159

  Fly   329 QYR-LVPF-EREDGSHGKRVRLYLIDLDSANGTFLNNKKIDARKYYELIEKDVIKFGFSSREYVL 391
            |:| ..|. :.||...|    .||.||.|.:|||||..:|..|.|..:....||:||.|:|.::|
  Rat   160 QHRGSDPSGDSEDQGQG----FYLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVIRFGGSTRLFIL 220

  Fly   392 LHENSKEDQE 401
              :..:||:|
  Rat   221 --QGPEEDRE 228

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17168	NP_001015254.1	FHA	280..395	CDD:238017	44/116 (38%)
CG17168	NP_001015254.1	FHA	<294..411	CDD:224630	42/110 (38%)
Slc4a1ap	XP_038967837.1	minC	<12..>121	CDD:178806	19/89 (21%)
		FHA	113..221	CDD:238017	44/114 (39%)
		DSRM_Kanadaptin	309..391	CDD:380685
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D955935at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920