DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17168 and pmlr-1

DIOPT Version :10

Sequence 1:NP_001015254.1 Gene:CG17168 / 3354996 FlyBaseID:FBgn0039943 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_491217.1 Gene:pmlr-1 / 171946 WormBaseID:WBGene00016323 Length:299 Species:Caenorhabditis elegans


Alignment Length:317 Identity:150/317 - (47%)
Similarity:196/317 - (61%) Gaps:27/317 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 DSPERSNSHRN-STRQRRNTRSRSRERSERERDRDCERNKERDYNMQSSKERW--QRSPALRHRS 164
            ||| |...||: |..:||.:|||||:|..|   ||..|:.......:..:|::  ..||..|...
 Worm     4 DSP-RDRRHRDRSPERRRRSRSRSRDRQTR---RDTRRDDSPKIKREVKEEQFSDNDSPRRRRDD 64

  Fly   165 RSSERKNRERDRQRRPTERRPVRRSQSPRDRCHGGRDLDQRRQRNQRHNNSNKNEDDHYVWGKEV 229
            |...|.:|   |..|..:||..|..:..|||....|..|..|:..:::....|.|:    |||..
 Worm    65 RGGRRDDR---RDNRRDDRRDHRDDRGDRDRRDNFRRPDPVREDGKQYGLEKKEEN----WGKPE 122

  Fly   230 DEKVPAENDVPVDKEKPNFGLSGALTEDTNKLNGVVVKYSEPPEARKPKRRWRLYPFKGETALPT 294
            :   ||:     :|||.|.|.|||||||||...|||:||:|||||:||..||||||||||.:|..
 Worm   123 E---PAK-----EKEKVNLGTSGALTEDTNTFRGVVIKYNEPPEAKKPNARWRLYPFKGEESLQV 179

  Fly   295 LHIHRQSCFLVGRDRKVVDLAVDHPSCSKQHAALQYRLVPFEREDGSHGKRVRLYLIDLDSANGT 359
            |:|||||.:|:|||.|:.|:.|||||||||||.||:|.:||.|:||:..:|:..|:|||.|.|||
 Worm   180 LYIHRQSAYLIGRDHKIADIPVDHPSCSKQHAVLQFRSMPFTRDDGTKARRIMPYIIDLGSGNGT 244

  Fly   360 FLNNKKIDARKYYELIEKDVIKFGFSSREYVLLHE---NSKEDQEDDDVHIKDEPHD 413
            |||.|||:.::|.||.|||::|||||:||||::.|   ..:|..|.:||  |.|..|
 Worm   245 FLNEKKIEPQRYIELQEKDMLKFGFSTREYVVMKEREITEEELAEGEDV--KKEESD 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17168NP_001015254.1 SF-CC1 138..>246 CDD:273721 28/109 (26%)
FHA_SNIP1 246..394 CDD:438770 95/147 (65%)
pmlr-1NP_491217.1 FHA_SNIP1 132..279 CDD:438770 95/146 (65%)

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