DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(f) and RNA14

DIOPT Version :9

Sequence 1:NP_001015241.3 Gene:su(f) / 3354994 FlyBaseID:FBgn0003559 Length:765 Species:Drosophila melanogaster
Sequence 2:NP_013777.1 Gene:RNA14 / 855083 SGDID:S000004665 Length:677 Species:Saccharomyces cerevisiae


Alignment Length:659 Identity:164/659 - (24%)
Similarity:304/659 - (46%) Gaps:98/659 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VRAQQVVELRPYDIESWSVMIREAQTRPIH-EVRSLYESLVNVFPTTARYWKLYIEMEMRSRYYE 83
            :|.::.::..|.:|.|:..:|:..:|:..: :||.:||...|.||..:..|.|.::.|:....:|
Yeast    29 LRLRERIKDNPTNILSYFQLIQYLETQESYAKVREVYEQFHNTFPFYSPAWTLQLKGELARDEFE 93

  Fly    84 RVEKLFQRCLV-KILNID--LWKLYLTYVKETKSGLSTHKEKMA---QAYDFALEKIGM-DLHSF 141
            .|||:..:||. |:.|.|  ||..||.|::...:.::..:|..|   :|:...::|..: :..|.
Yeast    94 TVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITGGQEARAVIVKAFQLVMQKCAIFEPKSS 158

  Fly   142 SIWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEKM 206
            |.|.:|:.||...:....:.|.|:|..:|..|:|.:..|...:|::|..|..:||.||.:.:.|.
Yeast   159 SFWNEYLNFLEQWKPFNKWEEQQRIDMLREFYKKMLCVPFDNLEKMWNRYTQWEQEINSLTARKF 223

  Fly   207 SLERSKDYMNARRVAKELEYHTKGLNR------------NLPAVPPTLTKEEVKQVELWKRFITY 259
            ..|.|.:||.||.:.:|....|.||.|            |:|  .|..:...::|:::|..:|.:
Yeast   224 IGELSAEYMKARSLYQEWLNVTNGLKRASPINLRTANKKNIP--QPGTSDSNIQQLQIWLNWIKW 286

  Fly   260 EKSNPLR-TEDTALVTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGVRTSVENI-- 321
            |:.|.|. :||  ::::|:.:..:|.:..:.....:|:..|.:       ::|...|   :||  
Yeast   287 ERENKLMLSED--MLSQRISYVYKQGIQYMIFSAEMWYDYSMY-------ISENSDR---QNILY 339

  Fly   322 SPILCVPVVNQIEWVMAFAWWWAKDVQAAKIFADECANIL---ERSINGVLNRNALLYFAYADFE 383
            :.:|..|....:.:.::..:....|.::.....|:|...|   .:.|...:|..          |
Yeast   340 TALLANPDSPSLTFKLSECYELDNDSESVSNCFDKCTQTLLSQYKKIASDVNSG----------E 394

  Fly   384 EGRLKYEKVHTMYNKLLQLPDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYH-IFVA 447
            :...:||: ..:|.:..:|     |.|:..||...:|..|:.:||::|.|.|:..|...| ::|.
Yeast   395 DNNTEYEQ-ELLYKQREKL-----TFVFCVYMNTMKRISGLSAARTVFGKCRKLKRILTHDVYVE 453

  Fly   448 AALMEYYCSKDKEIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFE-RVLSSGGLSP 511
            .|.:|:....|.:.||::.|||||.|.....|:..|:|:|..||:|:..:.||| .|.....|:.
Yeast   454 NAYLEFQNQNDYKTAFKVLELGLKYFQNDGVYINKYLDFLIFLNKDSQIKTLFETSVEKVQDLTQ 518

  Fly   512 HKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVF--ENLKE-YEGKETAQLVDRYKFLDL----- 568
            .|  |::.:.:.:||..|:|:::..:|:|....|  |||.| :..:...|..:..|.|:|     
Yeast   519 LK--EIYKKMISYESKFGNLNNVYSLEKRFFERFPQENLIEVFTSRYQIQNSNLIKKLELTYMYN 581

  Fly   569 ------------------YPCTSTELKSIGYAENVGIILNKVGGGAQSQNTGEVETDSEATPPLP 615
                              |..:|::.|.         ::.:.|......|. :.:.|||.  |..
Yeast   582 EEEDSYFSSGNGDGHHGSYNMSSSDRKR---------LMEETGNNGNFSNK-KFKRDSEL--PTE 634

  Fly   616 RPDFSQMIP 624
            ..|...:||
Yeast   635 VLDLLSVIP 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(f)NP_001015241.3 RNA14 19..550 CDD:227438 147/559 (26%)
HAT 48..78 CDD:214642 10/30 (33%)
Suf 408..682 CDD:283497 66/245 (27%)
RNA14NP_013777.1 RNA14 1..677 CDD:227438 164/659 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344420
Domainoid 1 1.000 125 1.000 Domainoid score I1197
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1014
Inparanoid 1 1.050 188 1.000 Inparanoid score I925
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57539
OrthoFinder 1 1.000 - - FOG0001614
OrthoInspector 1 1.000 - - oto99055
orthoMCL 1 0.900 - - OOG6_102277
Panther 1 1.100 - - LDO PTHR19980
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1162
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

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