Protein Alignment su(f) and cstf3

DIOPT Version :10

• Sequence 1: NP_001015241.3
• Gene: su(f) / 3354994
• FlyBaseID: FBgn0003559
• Length: 765
• Species: Drosophila melanogaster
• Sequence 2: NP_998218.2
• Gene: cstf3 / 406326
• ZFINID: ZDB-GENE-040426-1997
• Length: 716
• Species: Danio rerio
• Alignment Length: 755
• Identity: 414/755 - (54%)
• Similarity: 548/755 - (72%)
• Gaps: 59/755 - (7%)

  Fly    13 EWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHEVRSLYESLVNVFPTTARYWKLYIEMEM 77
            |:..|::.:|::.:|..|||:::||::|||||.:||.:.|..||.||..||::.|:||||||.|:
Zfish    12 EYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEI 76

  Fly    78 RSRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFS 142
            :::.|::|||||||||:|:|:|||||.||:||:|||..|.::||||||||||||:||||::.|:.
Zfish    77 KAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQ 141

  Fly   143 IWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEKMS 207
            ||.|||.||:||||||:|||||:|||||||||:..|.|::.|||||:||..:|:.||..:::||.
Zfish   142 IWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYSKYEEGINVHLAKKMI 206

  Fly   208 LERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQVELWKRFITYEKSNPLRTEDTAL 272
            .:||:|||||||||||.|...|||:||.|:|||..:.:|.:|||:||::|.:||||||||||..|
Zfish   207 EDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTL 271

  Fly   273 VTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGVRTSVENISPILCVPVVNQIEWVM 337
            :|:|||||.|||||||.|||.:|::|:|:|:.|:::|.|||
Zfish   272 ITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKG------------------------ 312

  Fly   338 AFAWWWAKDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKVHTMYNKLLQL 402
                    |:..||:|:||.|||.||:|..:|.:|.||||::||:||.|:|:||||::||:||.:
Zfish   313 --------DMNNAKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKHEKVHSIYNRLLAI 369

  Fly   403 PDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFE 467
            .||||||||:||||||||||||||.||||||||||.|:|:|::|.||||||||||||.:||:|||
Zfish   370 EDIDPTLVYIQYMKFARRAEGIKSGRSIFKKAREDPRTRHHVYVTAALMEYYCSKDKSVAFKIFE 434

  Fly   468 LGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLS 532
            ||||::|..|||::.||||||||||||||||||||||:||.|||.||.|:|.|||.||||||||:
Zfish   435 LGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEKSGEIWARFLAFESNIGDLA 499

  Fly   533 SIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGY-----AENVGIILNKV 592
            ||:||||||...|::  ||||||||.|||||||:|||||:.:|||::||     |:...:|...|
Zfish   500 SILKVERRRFMAFKD--EYEGKETALLVDRYKFMDLYPCSPSELKALGYKDVSRAKYASLIPEAV 562

  Fly   593 GGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKPRPCAHPGAHPLAGGVFPQPPALAALCATLP 657
                .:.:|..::.:::..|..|:||..|||||:||..|.||.||:.|||||.|||...|...||
Zfish   563 ----VAPSTPALKDEADRKPEYPKPDTCQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLP 623

  Fly   658 PPNSFRGPFVSVELLFDIFMRLNLPDSAPQPNGDNEL-SPKIFDLAKSVHWIVDTSTYTGVQHSV 721
            ||:.|.||||.|:.:.:...|..|||:.   :...|| :.|..:::...:..|:       .|||
Zfish   624 PPSCFTGPFVQVDEMMEALRRCVLPDTV---DAAVELITGKQLEMSSEGNGPVE-------NHSV 678

  Fly   722 TAVPPRRRRLLPGGD-DSDDELQTAVPPSHDIYRLRQLKR 760
            .....:|    |..| |.:::..:..||.|||||.||.||
Zfish   679 ANKSLKR----PNADSDEEEDKGSIAPPIHDIYRARQQKR 714

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
su(f)	NP_001015241.3	RNA14	19..550	CDD:227438	322/530 (61%)
		Suf	408..682	CDD:428647	173/278 (62%)
cstf3	NP_998218.2	RNA14	1..515	CDD:227438	324/536 (60%)
		TPR repeat	31..60	CDD:276809	15/28 (54%)
		TPR repeat	65..92	CDD:276809	16/26 (62%)
		Suf	375..648	CDD:428647	173/278 (62%)