DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment su(f) and LOC100496477

DIOPT Version :9

Sequence 1:NP_001015241.3 Gene:su(f) / 3354994 FlyBaseID:FBgn0003559 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_031756597.1 Gene:LOC100496477 / 100496477 -ID:- Length:770 Species:Xenopus tropicalis


Alignment Length:764 Identity:415/764 - (54%)
Similarity:539/764 - (70%) Gaps:89/764 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHEVRSLYESLVNVFPTTARYWKLYIEMEM 77
            |:..|::.:|::.:|..|||:::||::|||||.:||.:.|..||.||..||::.|:||||||.|:
 Frog    78 EYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYEXLVAQFPSSGRFWKLYIEAEV 142

  Fly    78 RSRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFS 142
            :::..::|||||||||:|:|:|||||.|::||:|||..|.::||||||||||||:||||::.|:.
 Frog   143 KAKNDDKVEKLFQRCLMKVLHIDLWKCYVSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQ 207

  Fly   143 IWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEKMS 207
            ||.|||.||:||||||:|||||:|||||||||:..|.|::.|||||:||..:|:.||..:::||.
 Frog   208 IWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMI 272

  Fly   208 LERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQVELWKRFITYEKSNPLRTEDTAL 272
            .:||:|||||||||||.|...|||:||.|:|||..|.:|.:|||:.|::|.:||||||||||..|
 Frog   273 EDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQEAQQVEMGKKYIQWEKSNPLRTEDQTL 337

  Fly   273 VTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGVRTSVENISPILCVPVVNQIEWVM 337
            :|:|||||.|||||||.|||.:|::|.|:|:.|:::|.|||                        
 Frog   338 ITKRVMFAYEQCLLVLGHHPDIWYEAGQYLEQSSKLLAEKG------------------------ 378

  Fly   338 AFAWWWAKDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKVHTMYNKLLQL 402
                    |:..||:|:||.|||.||:|:.:|.:|.||||||||:||.|:||||.|::||:||.:
 Frog   379 --------DMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKTHSIYNRLLAI 435

  Fly   403 PDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFE 467
            .||||||||:|||:||||||||||.|.||||||||.|:|:|::|.|||||||||||..:||:|||
 Frog   436 EDIDPTLVYIQYMEFARRAEGIKSGRMIFKKAREDPRTRHHVYVTAALMEYYCSKDTSVAFKIFE 500

  Fly   468 LGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLSPHKSVEVWNRFLEFESNIGDLS 532
            ||||::|..||||:.||||||||||||||||||||||:||.|.|.||.|:|.|||.||||||||:
 Frog   501 LGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLA 565

  Fly   533 SIVKVERRRSAVFENLKEYEGKETAQLVDRYKFLDLYPCTSTELKSIGY-----AENVGIILNKV 592
            ||:|||:||...|:  :||||||||.|||||||:|||||:::|||::||     |:...:|.:.|
 Frog   566 SILKVEKRRYTAFK--EEYEGKETALLVDRYKFMDLYPCSTSELKALGYKDVSRAKLAALIPDPV 628

  Fly   593 GGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFKPRPCAHPGAHPLAGGVFPQPPALAALCATLP 657
                            :..|..|:||.||||||:||..|.||.||:.|||||.|||...|...||
 Frog   629 ----------------DRKPEYPKPDTSQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVILMKLLP 677

  Fly   658 PPNSFRGPFVSVELLFDIFMRLNLPDSAPQPNGDNELSPKIFDLAKSVHWIVDTSTYTGVQHSVT 722
            ||..|:||||.|:.:.:|..|..|||:                :.::|..|      ||.|..:.
 Frog   678 PPICFQGPFVQVDEIMEILWRCKLPDT----------------VEEAVRII------TGSQAEMN 720

  Fly   723 AV---PPRRRRLL------PGGDDSDDELQ--TAVPPSHDIYRLRQLKR 760
            ..   |...:.||      | .:|||||.:  :.|||.|||||.||.||
 Frog   721 MEGNGPVEGKTLLNKSVKRP-NEDSDDEEEKGSVVPPVHDIYRTRQQKR 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(f)NP_001015241.3 RNA14 19..550 CDD:227438 318/530 (60%)
HAT 48..78 CDD:214642 16/29 (55%)
Suf 408..682 CDD:283497 170/278 (61%)
LOC100496477XP_031756597.1 RNA14 66..598 CDD:227438 335/553 (61%)
Suf 441..702 CDD:399092 170/278 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217087at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.