DRSC/TRiP Functional Genomics Resources

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Protein Alignment su(f) and XB5939409

DIOPT Version :9

Sequence 1:NP_001015241.3 Gene:su(f) / 3354994 FlyBaseID:FBgn0003559 Length:765 Species:Drosophila melanogaster
Sequence 2:XP_031756596.1 Gene:XB5939409 / 100493745 XenbaseID:XB-GENE-5939410 Length:703 Species:Xenopus tropicalis


Alignment Length:801 Identity:317/801 - (39%)
Similarity:428/801 - (53%) Gaps:246/801 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EWGMERLVRAQQVVELRPYDIESWSVMIREAQTRPIHEVRSLYESLVNVFPTTARYWKLYIEMEM 77
            |:..|::.:|::.:|..|||:::||::|||||.:||.:.|..||.||..||::.|:||||||.|:
 Frog    94 EYVPEKVKKAEKKLEDNPYDLDAWSILIREAQNQPIDKARKTYERLVAQFPSSGRFWKLYIEAEV 158

  Fly    78 RSRYYERVEKLFQRCLVKILNIDLWKLYLTYVKETKSGLSTHKEKMAQAYDFALEKIGMDLHSFS 142
            :::.|::|||||||||:|:|:|||||.|::||:|||..|.::||||||||||||:||||::.|:.
 Frog   159 KAKNYDKVEKLFQRCLMKVLHIDLWKCYVSYVRETKRKLPSYKEKMAQAYDFALDKIGMEIMSYP 223

  Fly   143 IWQDYIYFLRGVEAVGNYAENQKITAVRRVYQKAVVTPIVGIEQLWKDYIAFEQNINPIISEKMS 207
            ||.|||..:..| .|.::.                          |             :|..:|
 Frog   224 IWVDYINAMIAV-CVASFT--------------------------W-------------VSSTLS 248

  Fly   208 LERSKDYMNARRVAKELEYHTKGLNRNLPAVPPTLTKEEVKQVELWKRFITYEKSNPLRTEDTAL 272
            :..|.|                                                           
 Frog   249 VCASLD----------------------------------------------------------- 254

  Fly   273 VTRRVMFATEQCLLVLTHHPAVWHQASQFLDTSARVLTEKGVRTSVENISPILCVPVVNQIEWVM 337
                                          .:|.:||                            
 Frog   255 ------------------------------GSSFKVL---------------------------- 261

  Fly   338 AFAWWWAKDVQAAKIFADECANILERSINGVLNRNALLYFAYADFEEGRLKYEKVHTMYNKLLQL 402
              .::.::|:..||:|:||.|||.||:|:.:|.:|.||||||||:||.|:||||.|::||:||.:
 Frog   262 --HFFLSQDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKTHSIYNRLLAI 324

  Fly   403 PDIDPTLVYVQYMKFARRAEGIKSARSIFKKAREDVRSRYHIFVAAALMEYYCSKDKEIAFRIFE 467
            .||||||||:||||||||||||||.|.||||||||.|:|:|::|.|||||||.|||..:||:|||
 Frog   325 EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDPRTRHHVYVTAALMEYYFSKDTSVAFKIFE 389

  Fly   468 LGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVL---------------------------- 504
            ||||::|..||||:.||||||||||||||||||||.:                            
 Frog   390 LGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERKIRVSLNINFVYGRPVIETAVRDDSLKSRT 454

  Fly   505 ---SSGGLSPHKSVEVWNRFLEFESNIGDLSSIVKVERRRSAVFENLKEYEGKETAQLVDRYKFL 566
               ::..|..:..:|:|.|||.||||||||:||:|||:||...|:  :||||||||.|||||||:
 Frog   455 FPCAALSLLLYTVIEIWARFLAFESNIGDLASILKVEKRRYTAFK--EEYEGKETALLVDRYKFM 517

  Fly   567 DLYPCTSTELKSIGY-----AENVGIILNKVGGGAQSQNTGEVETDSEATPPLPRPDFSQMIPFK 626
            |||||:::|||::||     |:...:|.:.|...:.:.:   ::.|.:..|..|:||.||||||:
 Frog   518 DLYPCSTSELKALGYKDVSRAKLAALIPDPVIAPSIAPS---LKDDVDRKPEYPKPDTSQMIPFQ 579

  Fly   627 PRPCAHPGAHPLAGGVFPQPPALAALCATLPPPNSFRGPFVSVELLFDIFMRLNLPDSAPQP--- 688
            ||..|.||.||:.|||||.|||...|...||||..|:||||.|:.:.:|..|..|||:..:.   
 Frog   580 PRHLAPPGLHPVPGGVFPVPPAAVILMKLLPPPICFQGPFVQVDEIMEILRRCKLPDTVEEAVRI 644

  Fly   689 ------------NGDNELSPKIFDLAKSVHWIVDTSTYTGVQHSVTAVPPRRRRLLPGGDDSDDE 741
                        ||..|::..   |.|||                       :|   ..:|||||
 Frog   645 ITGSQAEMNMEGNGPVEVNTL---LNKSV-----------------------KR---PNEDSDDE 680

  Fly   742 LQ--TAVPPSHDIYRLRQLKR 760
            .:  :.|||.|||||.||.||
 Frog   681 EEKGSVVPPVHDIYRTRQQKR 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
su(f)NP_001015241.3 RNA14 19..550 CDD:227438 220/561 (39%)
HAT 48..78 CDD:214642 16/29 (55%)
Suf 408..682 CDD:283497 164/309 (53%)
XB5939409XP_031756596.1 RNA14 86..518 CDD:227438 237/584 (41%)
TPR repeat 113..142 CDD:276809 15/28 (54%)
TPR repeat 147..174 CDD:276809 16/26 (62%)
Suf 330..635 CDD:399092 164/309 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D217087at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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