DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and yrbG

DIOPT Version :10

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_417663.1 Gene:yrbG / 947730 ECOCYCID:EG12802 Length:325 Species:Escherichia coli


Alignment Length:452 Identity:83/452 - (18%)
Similarity:152/452 - (33%) Gaps:172/452 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VIASLYLFVALAVV--CDEYFVPAVEKICAALNMSNDVAGATFMAAATSAPELFVNVIGTFITEG 111
            ::|:..|.|.|.:|  ..:..|.|...:|....:...:.|.|.::..||.||:.|::..:...:.
E. coli     2 LLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTVVSIGTSLPEVIVSLAASLHEQR 66

  Fly   112 DIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAYGVTVAILI-CVMHDERVEWYE 175
            |:.|||.:||.:.|||.:.....:....|:..|   :.|..:...:.|:::. .|::|.::...:
E. coli    67 DLAVGTALGSNIINILLILGLAALVRPFTVHSD---VLRRELPLMLLVSVVAGSVLYDGQLSRSD 128

  Fly   176 ALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSNCSIHTKNSNEKEPELVENRICQNMA 240
            .:.|:.|..::|..:             ||.||...|....|                       
E. coli   129 GIFLLFLAVLWLLFI-------------VKLARQAERQGTDS----------------------- 157

  Fly   241 NIQLNGGLNKEQAKATSTSGAGTTAISITTSTMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPL 305
                   |.:||                                                     
E. coli   158 -------LTREQ----------------------------------------------------- 162

  Fly   306 DDAEAESHVAVAAADEGRKEEGYSLLSYPKDKSCFAQFTW----LIIWPIHLLFRIAIPDCKKAK 366
                                    |...|:|......|.|    |||.|:  ..|:.:.:.    
E. coli   163 ------------------------LAELPRDGGLPVAFLWLGIALIIMPV--ATRMVVDNA---- 197

  Fly   367 NNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRG 431
                                       |::.:...|.:..||:|.:|.|||:||..:::...::|
E. coli   198 ---------------------------TVLANYFAISELTMGLTAIAIGTSLPELATAIAGVRKG 235

  Fly   432 HGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLL 493
            ...:.:.|.||:|.|:|::.||:|.|       |.||:  :...:...:||.:.|:|.:|.|
E. coli   236 ENDIAVGNIIGANIFNIVIVLGLPAL-------ITPGE--IDPLAYSRDYSVMLLVSIIFAL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 2A1904 <29..527 CDD:273344 83/452 (18%)
yrbGNP_417663.1 PRK10734 1..325 CDD:182684 83/452 (18%)

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