DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and Slc24a3

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_445957.2 Gene:Slc24a3 / 85267 RGDID:69256 Length:642 Species:Rattus norvegicus


Alignment Length:579 Identity:236/579 - (40%)
Similarity:328/579 - (56%) Gaps:81/579 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85
            |||:||:.:||||:||...|:.|||||||:.::|:|.|||:|||::|||::||||..|::|.|||
  Rat    85 NCTEPALHEFPRDIFSNEDRRQGAVVLHVLCAMYMFYALAIVCDDFFVPSLEKICERLHLSEDVA 149

  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150
            |||||||.:||||||.:|||.|||:||:||||||||||||||.:...||:.||..:.|..|.|.|
  Rat   150 GATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLR 214

  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKC----AKG------GVK 205
            |||.|.::|..||..::||:|.|:|:|:||.:|.:|:.:|.::....:|    .||      |:.
  Rat   215 DSIYYTLSVVALIVFIYDEKVSWWESLVLVLMYLIYIIIMKYNACIHQCFERRTKGAGNMVNGLA 279

  Fly   206 QARSRSRSSNC----------SIHTKNSNEKEPELV------------------------ENRIC 236
            .......||||          :.|.|.|.....||:                        :.|: 
  Rat   280 NNAEIDDSSNCDATVVLLKKANFHRKASVIMVDELLSAYPHQLSFSEAGLRIMITSHFPPKTRL- 343

  Fly   237 QNMANIQLNGGLNKEQAKATS---TSGAGTTAISITTSTMTTTLSTTHSAGGGGGAVGLCSGPGA 298
             :||:..|   :|:.|....|   |:|....||.|...         |:...|   .|..|.|..
  Rat   344 -SMASRML---INERQRLINSRAYTNGESEVAIKIPIK---------HTVENG---TGPSSAPDR 392

  Fly   299 IVQMAPLDD--AEAESHVAVAAADEGRK---------EEG-YSLLSYPKDKSCFAQFTWLIIWPI 351
            .|.....||  |||::.......||..:         :|| |:....|..|  .....|...||:
  Rat   393 GVNGTRRDDIVAEADNETENENEDENNENDEEEDEDDDEGPYTPFDPPSGK--LETVKWAFTWPL 455

  Fly   352 HLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGT 416
            ..:....:|:|.|....|.|.:||....:||.:.||::.||:||||.||.|||.:||||||||||
  Rat   456 SFVLYFTVPNCNKPHWEKWFMVTFASSTLWIAAFSYMMVWMVTIIGYTLGIPDVIMGITFLAAGT 520

  Fly   417 SVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGLEY 481
            |||:.::|:|||::|.|.|.:.||||||.||||:.||:||.::.:  .:..| :|:.:||.||.|
  Rat   521 SVPDCMASLIVARQGMGDMAVSNSIGSNVFDILIGLGLPWALQTL--AVDYG-SYIRLNSRGLIY 582

  Fly   482 SAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNLPTCG 540
            |...||:::|:.......||::||||:|..||.:|.||:.|:.:.|.|||..||||.||
  Rat   583 SVGLLLASVFVTVFGVHLNKWQLDKKLGCGCLFLYGVFLCFSIMTEFNVFTFVNLPMCG 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 210/534 (39%)
Na_Ca_ex 48..192 CDD:279963 83/143 (58%)
Na_Ca_ex 370..525 CDD:279963 76/154 (49%)
Slc24a3NP_445957.2 TIGR00367 111..604 CDD:273039 199/514 (39%)
Na_Ca_ex 112..254 CDD:279963 82/141 (58%)
Na_Ca_ex 474..626 CDD:279963 76/154 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338073
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41390
Inparanoid 1 1.050 416 1.000 Inparanoid score I1765
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.910

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