DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zyd and CCX4

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_564650.1 Gene:CCX4 / 841851 AraportID:AT1G54115 Length:644 Species:Arabidopsis thaliana


Alignment Length:577 Identity:116/577 - (20%)
Similarity:221/577 - (38%) Gaps:136/577 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LLFCYINCTQPAIDDFPRDLFSEAQRQSGAVVLHV--IASLYLFVALAVVCDEYFVPAVEKICAA 77
            |.|.|.:|         ||.     :..|.::|.|  :|..||   |.....:||..::||:...
plant   122 LKFFYCSC---------RDF-----KILGYILLGVWLVALFYL---LGNTAADYFCCSLEKLSKL 169

  Fly    78 LNMSNDVAGATFMAAATSAPELFVNVIGTFI--TEGDIGVGTIVGSAVFNILAVAACCGIG---- 136
            |.:...|||.|.:.....||::|.: |..|:  .:|::|:.:::|.|||     ..|..:|    
plant   170 LRLPPTVAGVTLLPLGNGAPDVFAS-IAAFVGSDKGEVGLNSVLGGAVF-----VTCVVVGIVSL 228

  Fly   137 --AGMTIPLDWWPLTRDSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKC 199
              |...:.:|.....||...:..|:..|:.::...:|....|:..||:|..|.:::..::..:|.
plant   229 CVADKEVKIDKKCFIRDLSFFLFTLVALMVILMVGKVTVGIAIAFVSIYVFYASLVAANEILRKH 293

  Fly   200 AKGGVKQARSRSRSSNCSIHTKNSNEKE---------------PELVENRICQNM--ANIQLNG- 246
            ::.....:.:.......|:.:..|.|::               |..:.:.:.|.|  .|:.:.. 
plant   294 SRRLKLDSITPLLPMQGSVFSSPSVEEDIPMYSPLMELDTGEGPPRLHDSLPQWMWATNVAIYSN 358

  Fly   247 ---------------GLNKEQAKATSTSGAGTTAISITTSTMTTTL----------STTHSAGGG 286
                           |..::.|:..|:..:..|::..|..|:...|          |.|::.   
plant   359 HFAKANVHDEERPPWGWTEDGAEVESSLCSKITSLLETPLTVPRRLTIPLIEEDSWSKTYAV--- 420

  Fly   287 GGAVGLCSGPGAIVQMAPL---------DDAEAESHVAVAAADEGRKEEGYSLLSYPKDKSCFAQ 342
                       |.|.:||:         ||...::.:.                         |.
plant   421 -----------ASVSLAPVLLSFLWSSQDDTSLQARIV-------------------------AY 449

  Fly   343 FTWLIIWPI--HLLFRIAIPDCKKAKNNKIFPLT---FIMCIVWIGSLSYVVAWMITIIGDTLKI 402
            |..:.|...  :|.|:...||  :.....:.|..   |||.|||...::..:..::...|....|
plant   450 FIGIAIGSTLGYLAFKNTEPD--RPPQIYLIPWVLGGFIMSIVWFYMIANELVALLVTFGGIYGI 512

  Fly   403 PDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNS--IGSNTFDILLCLGVPWLIKAVFFPI 465
            ..|::|:|.||.|.|:.:.||::.::..|...:.|..|  .....|:.|:.||:...:.|  :..
plant   513 NPSILGLTVLAWGNSMGDLVSNIALSMNGGDGVQIALSGCYAGPMFNTLVGLGMSMFLGA--WSK 575

  Fly   466 QPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVF 522
            .| :.|:......|.|:...|:..|....:....|:.:.:|.:|...:.:||:|:.|
plant   576 SP-ETYMIPEDNSLFYTLGFLIFGLIWSLVMLPRNEMRPNKVMGIGLITLYLIFVTF 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 108/544 (20%)
Na_Ca_ex 48..192 CDD:279963 39/153 (25%)
Na_Ca_ex 370..525 CDD:279963 39/158 (25%)
CCX4NP_564650.1 PLN03151 1..644 CDD:215604 116/577 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3391
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 135 1.000 Inparanoid score I1830
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

Return to query results.
Submit another query.