DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zyd and slc24a5

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_001025451.1 Gene:slc24a5 / 570312 ZFINID:ZDB-GENE-031210-1 Length:513 Species:Danio rerio


Alignment Length:530 Identity:180/530 - (33%)
Similarity:281/530 - (53%) Gaps:88/530 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAG 86
            |.||...:||...|:..:|:.|.::::.:...|:.:::::||||||:|::|.|...|.:|.||||
Zfish    58 CVQPQSSEFPEGFFTVQERKDGGILIYFMIIFYMLLSVSIVCDEYFLPSLEVISERLGLSQDVAG 122

  Fly    87 ATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRD 151
            ||||||.:|||||....:|.|:|:|||||.||:||||:|:|.:.|.||:.:.....|..|||.||
Zfish   123 ATFMAAGSSAPELVTAFLGVFVTKGDIGVSTIMGSAVYNLLCICAACGLLSSAVGRLSCWPLFRD 187

  Fly   152 SIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSNC 216
            .:||.::||.:|.::.|.||.||:...|:.:|.||:||:.||....:..         ..|.|.|
Zfish   188 CVAYAISVAAVIAIISDNRVYWYDGACLLLVYGVYVAVLCFDLRISEYV---------MQRFSPC 243

  Fly   217 ----SIHTKNSNEKEPELVENRICQNMANIQLNGGLN----KEQAKATSTSGAGTTAISITTSTM 273
                ....::|.|::|               |.|..:    :.|.::.:.||.            
Zfish   244 CWCLKPRDRDSGEQQP---------------LVGWSDDSSLRVQRRSRNDSGI------------ 281

  Fly   274 TTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEGRKE---EGYSLLSYPK 335
                                           ..|....||::::.  .|..|   |..|:.|.|.
Zfish   282 -------------------------------FQDDSGYSHLSLSL--HGLNEISDEHKSVFSMPD 313

  Fly   336 DKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTL 400
            ..  ..:..|::..|:..|..:::|||::......:.|||:|..|||.:.:||:.||:||:|:||
Zfish   314 HD--LKRILWVLSLPVSTLLFVSVPDCRRPFWKNFYMLTFLMSAVWISAFTYVLVWMVTIVGETL 376

  Fly   401 KIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPI 465
            .|||:|||:|.||||||:|:.|:||:||:.|...|.:.|.:|||.|| :||||:||.|:.||..:
Zfish   377 GIPDTVMGMTLLAAGTSIPDTVASVMVAREGKSDMAMSNIVGSNVFD-MLCLGLPWFIQTVFVDV 440

  Fly   466 -QPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELN 529
             .|    |.:||:||.:.:.|||.::..|:|....|.:||:.|:|..||..|::|...:.|.||.
Zfish   441 GSP----VEVNSSGLVFMSCTLLLSIIFLFLAVHINGWKLNWKLGLVCLACYILFATLSILYELG 501

  Fly   530 VFFRVNLPTC 539
            :.....:.:|
Zfish   502 IIGNNPIRSC 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 168/487 (34%)
Na_Ca_ex 48..192 CDD:279963 68/143 (48%)
Na_Ca_ex 370..525 CDD:279963 72/155 (46%)
slc24a5NP_001025451.1 ECM27 81..497 CDD:223604 168/491 (34%)
Na_Ca_ex 84..228 CDD:279963 68/143 (48%)
Na_Ca_ex 346..497 CDD:279963 72/155 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.