DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and slc24a6a

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_009289475.1 Gene:slc24a6a / 561209 ZFINID:ZDB-GENE-100922-39 Length:639 Species:Danio rerio


Alignment Length:565 Identity:214/565 - (37%)
Similarity:312/565 - (55%) Gaps:78/565 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 AIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVAGATFM 90
            ||.:||:|:|::.||:.||::|||..::|:|.|||:|||.:|||::||||..|::|.||||||||
Zfish    88 AIHEFPQDIFTKGQRRHGAILLHVFCAVYMFYALAIVCDVFFVPSLEKICENLHLSEDVAGATFM 152

  Fly    91 AAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTRDSIAY 155
            ||.:||||||.::||.|||:||:||||||||||||||.:...|||.||.||.|.||||.||||.|
Zfish   153 AAGSSAPELFTSLIGVFITKGDLGVGTIVGSAVFNILVIIGVCGIFAGQTITLTWWPLFRDSIFY 217

  Fly   156 GVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTF------------QKCAKGGVKQAR 208
            .::|..||.:::||:|.|:|.:||:|:|.||:.:|.|:...            |.|....:::..
Zfish   218 ILSVLALILIIYDEKVIWWETIILISMYGVYILIMKFNSQIWGWVEQRFGIPGQPCLVSSLRRDV 282

  Fly   209 SRSRSS-NCS----IHTKNSN---EKEPELVENRICQ------NMANIQLNGGLNKEQAKATSTS 259
            |...:| :|.    :..|..|   :..|.::.:.:..      :.:...|...:....:..|..|
Zfish   283 SVGEASPHCDTSMILLKKGQNAGGQDSPVVMVDELMSLHPHQFSFSEASLRVMITPHFSPRTRLS 347

  Fly   260 GAGTTAISITTSTMTTTLSTTHSAGGGGGAVGLCSGPGA-------------------------- 298
            .||...|: ....:....|...|:|.|.|......|||.                          
Zfish   348 MAGRMLIT-ERQRLIRNRSPGDSSGSGAGDTPGQDGPGMEAVPWGLENGGALESETQPLEEPRRR 411

  Fly   299 -----------IVQMAPLDDAEAESHVAVAAADEGRKEEGYSLLSYPKDKSCFAQFTWLIIWPIH 352
                       |....|.||.|.|         |...||.:...:.|:.:  :.|..|:..||:.
Zfish   412 SQGGELERVADIEDTQPKDDEEDE---------EEADEEPFRPFTVPEGR--WEQAKWMFSWPLS 465

  Fly   353 LLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTS 417
            .|....:|:|...:..:.|.:||:...:||...||::.||:|||..||.|||.||||||||||||
Zfish   466 CLLYYTVPNCVLPRWERWFMVTFVASTLWIAVFSYLMVWMVTIISFTLDIPDVVMGITFLAAGTS 530

  Fly   418 VPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGLEYS 482
            ||:.::|:|||::|.|.|.:.||||||.|||||.||.||.::.:.  :..|.. |:|||.||.||
Zfish   531 VPDCMASLIVARQGMGDMAVSNSIGSNIFDILLGLGFPWALRTLV--VDYGST-VSINSKGLVYS 592

  Fly   483 AITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIE 527
            .|.||:::||..|:...|.::||:::|...:.:|.:|::.:...|
Zfish   593 VILLLASVFLTVLSVHLNHWRLDRRLGLGLMFLYAIFLLCSICFE 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 203/538 (38%)
Na_Ca_ex 48..192 CDD:279963 88/143 (62%)
Na_Ca_ex 370..525 CDD:279963 74/154 (48%)
slc24a6aXP_009289475.1 Na_Ca_ex <85..637 CDD:332332 213/563 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577438
Domainoid 1 1.000 187 1.000 Domainoid score I3263
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 407 1.000 Inparanoid score I1859
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm25347
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.810

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