DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and slc24a1

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_009291877.2 Gene:slc24a1 / 558299 ZFINID:ZDB-GENE-060503-191 Length:741 Species:Danio rerio


Alignment Length:605 Identity:184/605 - (30%)
Similarity:286/605 - (47%) Gaps:110/605 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDD-------FPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAAL 78
            |.|.|...|       :|.|:||...|:.|.|.||:...:|:||:||:||||:|||.:..|...|
Zfish   139 NTTAPQPGDAPHMKGEYPEDIFSIEDRRKGWVSLHIFGMVYMFVSLAIVCDEFFVPTLGVITDKL 203

  Fly    79 NMSNDVAGATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPL 143
            .:|:||||||||||..||||||.::||.||:..::|:||||||||||||.|...|.:.:...:.|
Zfish   204 AISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGSAVFNILFVIGMCALFSREMLHL 268

  Fly   144 DWWPLTRDSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQAR 208
            .||||.||...|.:.:.:||....|..:.|:|:::||..||:|:..|.|:...::..|..:.:.:
Zfish   269 TWWPLFRDVSFYILDLIMLIIFFLDNTIMWWESMMLVGGYALYVTFMKFNVQLERAFKSQLSKHK 333

  Fly   209 S----------------------------RSR----------SSNCSIHTK-------------- 221
            |                            ::|          .|:.|:|..              
Zfish   334 SIVKVIAVEEPEKDNGTSGEENRPPEPEDKNRLKLKPTLQRGGSSASLHNSTMRNTIFQLMIHTL 398

  Fly   222 ---------NSNEKEPELVENRI-CQNMANIQLNGGLNKEQAKATSTSGAGTTAISITTSTM--- 273
                     |.:.|....:|.:: .::.|.|..:....|.:.|....||.|......|..:.   
Zfish   399 DPLGEESVFNGDAKARSSLECKVKFKDKAQILNDMARGKVENKKKEKSGEGDDQSEQTKDSKDAP 463

  Fly   274 -------TTTLSTTH-----SAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEG---- 322
                   |...|...     :||||....|.....|        ||.|.:|.......|:.    
Zfish   464 PGAKDEDTNQKSEAQKDGDIAAGGGSENPGGSDNSG--------DDDEDDSDEESDDDDDDDDDD 520

  Fly   323 ----------RKEEGYSLLSYPKDKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIM 377
                      ..|:|...||.....:...|.|:|.:.||.....:.:||.:...:.|.|.:||:.
Zfish   521 DDDDDENEDEAGEDGDEPLSLEWPDTRRKQATYLFLLPIVFPLWLTVPDVRNPASKKFFVITFLG 585

  Fly   378 CIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIG 442
            .||||...||::.|....:|:|:.|.:.:||:|.||||||:|:.::|||||::|.|.|.:.:|:|
Zfish   586 SIVWIAIFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVG 650

  Fly   443 SNTFDILLCLGVPWLIKAVFFPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKK 507
            ||.|||.:.|.||||:.:.|....|    |.::|.||..:.:.|...|..:.::.:..|::::|.
Zfish   651 SNIFDITMGLPVPWLMFSFFHSFAP----VPVSSNGLFCAIVLLFLMLLFVIISIAACKWRMNKV 711

  Fly   508 VGTACLVMYLVFMVFASLIE 527
            :|....::|.||:|.:.::|
Zfish   712 LGFTMFILYFVFLVLSVMLE 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 171/566 (30%)
Na_Ca_ex 48..192 CDD:279963 70/143 (49%)
Na_Ca_ex 370..525 CDD:279963 58/154 (38%)
slc24a1XP_009291877.2 Na_Ca_ex <112..741 CDD:332332 184/605 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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