DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and slc24a3

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_685302.4 Gene:slc24a3 / 557196 ZFINID:ZDB-GENE-090312-67 Length:660 Species:Danio rerio


Alignment Length:574 Identity:223/574 - (38%)
Similarity:321/574 - (55%) Gaps:72/574 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85
            |||.|.|.:||.|:|::.:|..|||.|||:.::|:|.|||:|||:||||::||||..|::|.|||
Zfish   101 NCTPPGIHEFPDDIFTQQERLEGAVALHVLCAMYMFYALALVCDDYFVPSLEKICERLHLSEDVA 165

  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150
            |||||||.:||||||.:|||.|||:||:||||||||||||||.:...|||.....:.|..|.|.|
Zfish   166 GATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGIFTAQAVRLSCWTLMR 230

  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYF--------DKTFQKCAKGGVKQA 207
            ||..|.:.||.||..::||:|.|:|:|||:.||.||:.:|.|        ::..:..|..|...|
Zfish   231 DSTYYTIAVATLIVFIYDEKVTWWESLILIVLYLVYILIMKFNSRVVHFIERRKKNPANLGNGTA 295

  Fly   208 RSRSRSSNC----------SIHTKNSNEKEPELVE---NRICQNMANIQLNGGLNKEQAKATSTS 259
            .:......|          :.|.|.|.....||:.   :::..:.|.:::.  :....:..|..:
Zfish   296 SNTDIDDGCDATVVLLKKANFHRKPSVLMVDELLSAYPHQLTFSEAGMRIM--ITSHFSPRTRLT 358

  Fly   260 GAGTTAISITTSTMTTTLS------TTHSAGGGGGAVGLCSGP---------------------G 297
            .|....|:.....:.:..|      |....|..|...|| :||                     |
Zfish   359 MASRMLITERQRLINSRFSNGDSEVTVKMPGKRGVENGL-AGPDRGLNGRKGGHHDDDRGGAEAG 422

  Fly   298 AIVQMAPLDDAEAESHVAVAAADEGRKEEGYSLLSYPKDKSC----FAQFTWLIIWPIHLLFRIA 358
            ...:....|:...|:       ||..:||..:...|...: |    ..:..||:.||:.:|....
Zfish   423 TDTENENEDNENNEN-------DEEEEEEDENEGPYVPFR-CPGGGINKLKWLLAWPLSMLLFFT 479

  Fly   359 IPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVS 423
            :|:....:..:.:.::||...:||...||::.||:|:||.|:.|||.:|||||||||||||:.::
Zfish   480 VPNSANPRWERWYMVSFISSTIWIAFFSYIMVWMVTVIGYTMGIPDVIMGITFLAAGTSVPDCLA 544

  Fly   424 SVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVFFPIQPGQNY---VAINSAGLEYSAIT 485
            |:|||::|.|.|.|.||||||.||||:.||:||.::.:..      ||   :.:||.||.:|...
Zfish   545 SLIVARQGMGDMAISNSIGSNVFDILIGLGLPWALQTLAI------NYGSTIHLNSKGLIFSVGL 603

  Fly   486 LLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASLIELNVFFRVNLPTC 539
            ||:::||..|....|.:||||::|.|||:||.||:.|:.|||.|:|..||||||
Zfish   604 LLASVFLTVLGVHLNNWKLDKRLGFACLLMYAVFLCFSILIEFNIFTFVNLPTC 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 198/530 (37%)
Na_Ca_ex 48..192 CDD:279963 85/143 (59%)
Na_Ca_ex 370..525 CDD:279963 76/157 (48%)
slc24a3XP_685302.4 TIGR00367 127..637 CDD:273039 196/526 (37%)
Na_Ca_ex 128..270 CDD:279963 84/141 (60%)
Na_Ca_ex 491..643 CDD:279963 76/157 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577441
Domainoid 1 1.000 187 1.000 Domainoid score I3263
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41390
Inparanoid 1 1.050 407 1.000 Inparanoid score I1859
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm25347
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1775
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1615.840

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