DRSC/TRiP Functional Genomics Resources

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Protein Alignment zyd and slc24a4a

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:XP_005158898.1 Gene:slc24a4a / 550467 ZFINID:ZDB-GENE-050417-291 Length:621 Species:Danio rerio


Alignment Length:552 Identity:217/552 - (39%)
Similarity:311/552 - (56%) Gaps:61/552 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAIDDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSNDVA 85
            |||.|||.:||.|||:..||..|||:||:.|:||:|:|||:|||:|||.::||||..|::|.|||
Zfish    93 NCTAPAIHEFPEDLFTNQQRSQGAVLLHIFAALYMFLALAIVCDDYFVTSLEKICEKLHLSEDVA 157

  Fly    86 GATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWPLTR 150
            |||||||.:||||||.::||.|||.||:||||||||||||||.:...|||.||..:.|..:.:.|
Zfish   158 GATFMAAGSSAPELFASIIGVFITHGDVGVGTIVGSAVFNILCIIGVCGIFAGQVVFLTKYAVFR 222

  Fly   151 DSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFDKTFQKCAKGGVKQARSRSRSSN 215
            ||..|.::|..||..::|:.:.|:|:|:|:.:|..|:.||.|:.:.|....|   :...|..:.|
Zfish   223 DSSYYIISVIALIVFIYDDEILWWESLVLIVMYLGYIIVMKFNTSLQNLFNG---KEDKRVTNGN 284

  Fly   216 CSIHTKNSNEKEP------------------ELVENRICQNMANIQLNGGLNKE----------- 251
            ..     |:|.||                  .:..|:|....:.:.::..:|..           
Zfish   285 AV-----SSEMEPGNDCFEQFWDDPSWPLLAPVKPNKIYTRGSVVMVDEMMNSSPPHYRFPEAGL 344

  Fly   252 QAKATSTSGAGTTAISITTSTMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAV 316
            :...|:..|..|.....:...:........||.|              |....:.|.:|::....
Zfish   345 RVMITNHFGPKTRLRMASRLIINEQQRLVKSANG--------------VDSVLVSDQKADTMENG 395

  Fly   317 AAADEGRKEEGYSLLS-YPKDKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIV 380
            ..|::...||..:.:| :...:.......:.|.|||.||....||:|.|.:....|.|:|.:..|
Zfish   396 NVAEDKLSEEQENEISPFRLPEGAMDTVKFFISWPISLLLYFTIPNCAKKRWECCFMLSFFLSTV 460

  Fly   381 WIGSLSYVVAWMITIIGDTLKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNT 445
            ||.:.||::.||:||:|.||.|||.:|||||||||||||:.::|:|||::|.|.|.:.|:||||.
Zfish   461 WIAAFSYILVWMVTIVGYTLGIPDVIMGITFLAAGTSVPDCIASLIVARQGLGDMAVSNTIGSNV 525

  Fly   446 FDILLCLGVPWLIKAVFFPIQPGQNY---VAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKK 507
            ||||:.|||||.|:.:      ..||   |.|||.||.||.:.||.::.|..|....|:::||.:
Zfish   526 FDILVGLGVPWGIQTM------AVNYGSVVKINSRGLVYSVVLLLGSVALTVLGIHVNRWRLDLR 584

  Fly   508 VGTACLVMYLVFMVFASLIELNVFFRVNLPTC 539
            :|...||:|.:|:.|:.:||.|||..||||.|
Zfish   585 LGIYVLVLYAIFLTFSIMIEYNVFTFVNLPMC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 190/508 (37%)
Na_Ca_ex 48..192 CDD:279963 79/143 (55%)
Na_Ca_ex 370..525 CDD:279963 76/157 (48%)
slc24a4aXP_005158898.1 TIGR00367 119..596 CDD:273039 189/504 (38%)
Na_Ca_ex 120..262 CDD:279963 77/141 (55%)
Na_Ca_ex 451..602 CDD:279963 76/156 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577429
Domainoid 1 1.000 187 1.000 Domainoid score I3263
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 407 1.000 Inparanoid score I1859
OMA 1 1.010 - - QHG50092
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 1 1.000 - - otm25347
orthoMCL 1 0.900 - - OOG6_103920
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1463
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.810

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