DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zyd and Slc24a5

DIOPT Version :9

Sequence 1:NP_001015261.3 Gene:zyd / 3354992 FlyBaseID:FBgn0265767 Length:542 Species:Drosophila melanogaster
Sequence 2:NP_778199.2 Gene:Slc24a5 / 317750 MGIID:2677271 Length:501 Species:Mus musculus


Alignment Length:535 Identity:182/535 - (34%)
Similarity:279/535 - (52%) Gaps:91/535 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 NCTQPAI---DDFPRDLFSEAQRQSGAVVLHVIASLYLFVALAVVCDEYFVPAVEKICAALNMSN 82
            |.||.|:   .:||...|::.:...|.:|::.:..||:.:|:::|||:||:|::|.|..:|.:|.
Mouse    42 NSTQCAVSPASEFPEGFFTKQESTDGGIVIYFLIILYMCMAISIVCDKYFLPSLEIISDSLGLSQ 106

  Fly    83 DVAGATFMAAATSAPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMTIPLDWWP 147
            ||||||||||.:|||||....:|.|||:||||:.||:|||::|:|.:.|.||:.:.|...|..||
Mouse   107 DVAGATFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNMVSTLSCWP 171

  Fly   148 LTRDSIAYGVTVAILICVMHDERVEWYEALILVSLYAVYLAVMYFD--------KTFQKCAKGGV 204
            |.||...|.|:|..:..::.|.|:.|||...|:.:|.:|:.::.||        ||...|.    
Mouse   172 LFRDCAVYAVSVGAVFGIIFDNRIYWYEGAGLLLIYGLYVLLLCFDTTISRHVMKTCSPCC---- 232

  Fly   205 KQARSRSRSSNCSIHTKNSNEKEPELVENRICQNMANIQLNGGLNKEQAKATSTSGAGTTAISIT 269
             ...:|:........|....|.|.:|...|      ..:.:.|:.:|.      ||....::|: 
Mouse   233 -PCLARAMEERIEQQTLLGWEDESQLFIRR------QSRTDSGIFQED------SGYSQLSLSL- 283

  Fly   270 TSTMTTTLSTTHSAGGGGGAVGLCSGPGAIVQMAPLDDAEAESHVAVAAADEGRKEEGYSLLSYP 334
                       |         ||                   |.|:         |:..|:.|.|
Mouse   284 -----------H---------GL-------------------SQVS---------EDPPSVFSMP 300

  Fly   335 KDKSCFAQFTWLIIWPIHLLFRIAIPDCKKAKNNKIFPLTFIMCIVWIGSLSYVVAWMITIIGDT 399
              ::...:..|::..||..|..:..|||::......|.:||.|..:||.:.:|::.||:|:.|:|
Mouse   301 --EADLRRIFWVLSLPIITLLALTTPDCRRKFWKNYFVITFFMSALWISAFTYILVWMVTVTGET 363

  Fly   400 LKIPDSVMGITFLAAGTSVPEAVSSVIVAKRGHGSMGICNSIGSNTFDILLCLGVPWLIKAVF-- 462
            |.|||:|||:|.||||||:|:.|:||:||::|.|.|.|.|.:|||.|| :||||:||.||..|  
Mouse   364 LGIPDTVMGLTLLAAGTSIPDTVTSVLVARKGKGDMAISNIVGSNVFD-MLCLGLPWFIKTAFTN 427

  Fly   463 --FPIQPGQNYVAINSAGLEYSAITLLSTLFLLYLTFSTNKFKLDKKVGTACLVMYLVFMVFASL 525
              .||:       :||.||.|..|:|..::..|:|....|.:|||:|:|..|||:||.....:.|
Mouse   428 ASAPIE-------VNSKGLTYITISLNISILFLFLAVHFNGWKLDRKLGVVCLVLYLGLATLSVL 485

  Fly   526 IELNVFFRVNLPTCG 540
            .|:.:.....:..||
Mouse   486 YEIGIIGNNRIRGCG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zydNP_001015261.3 ECM27 46..522 CDD:223604 170/487 (35%)
Na_Ca_ex 48..192 CDD:279963 64/143 (45%)
Na_Ca_ex 370..525 CDD:279963 73/158 (46%)
Slc24a5NP_778199.2 Na_Ca_ex 72..216 CDD:279963 64/143 (45%)
TIGR00367 77..477 CDD:273039 167/475 (35%)
Na_Ca_ex 334..485 CDD:279963 73/158 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1168500at2759
OrthoFinder 1 1.000 - - FOG0000196
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10846
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

Return to query results.
Submit another query.